Streptomyces sp. PBH53: QR97_20900
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Entry
QR97_20900 CDS
T10303
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
stpb Streptomyces sp. PBH53
Pathway
stpb00040
Pentose and glucuronate interconversions
stpb01100
Metabolic pathways
stpb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
stpb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
QR97_20900
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
QR97_20900
Enzymes [BR:
stpb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
QR97_20900
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GFIT
Motif
Pfam:
Pectate_lyase_4
NosD
Motif
Other DBs
NCBI-ProteinID:
AKN71916
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Position
complement(4753866..4754822)
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AA seq
318 aa
AA seq
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MPLRALSGTTGTAVALATAVVLALPQPAGAADATPVGFGAGTTGGGSAPAVTVSTPDAFK
AAVTGSSAKVVKVNGLIALSGQVDIGSNTTVLGVGSSSGFTGGGLRLKKVGNVVLRNLNI
SKAVKTDAITIQASTKVWIDHNSLSSDRDHGKDYYDGLVDISHASDHVTVSWNVFKDHYK
GSLVGHSDNNASEDTGHLRVTYHHNWFDRVNSRIPSLRFGTGHFYDNYVVGAETAVHSRM
GAQLLVENNVFRDTQVAVTTSRDSDVDGYAVLRGNDLGGAATEISQNGGFTTPPYGYTAE
PASTVVASVTSGAGAGKI
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgagagcactctccggcacgaccgggacggccgtcgcgctggcgaccgcggtc
gtcctcgccctgccgcagccggccggcgcggccgacgcgacgccggtcggcttcggcgcc
gggacgaccggcggcggcagcgccccggcggtgaccgtctccaccccggacgccttcaaa
gcggccgtgaccggcagttcggcgaaggtggtgaaggtgaacggcctgatcgcgctgagc
gggcaggtcgacatcggctccaacaccaccgtgctgggcgtaggttcgtcctccggcttc
accggcggcggactgcgcctgaagaaggtcggcaatgtcgtcctgcgcaatctgaacatc
agcaaggccgtcaagacggacgccatcaccatccaggcgtccacgaaggtgtggatcgac
cacaactccctgtcctccgaccgcgatcacggcaaggactactacgacggcctggtcgac
atcagccacgcctccgaccacgtcacggtgtcctggaacgtcttcaaggaccactacaag
ggctcgctggtcggccacagcgacaacaacgcgagcgaggacaccgggcatctgcgggtg
acgtaccaccacaactggttcgaccgcgtcaactcccgcataccgagcctgcgtttcggc
accgggcacttctacgacaactacgtcgtcggcgcggagaccgccgtgcactcccgcatg
ggcgcgcaactgctcgtcgagaacaacgtcttccgcgacacccaggtcgccgtcaccacc
agccgggacagcgacgtcgacggatacgccgtcctgcgcggcaacgacctcggtggagcc
gccaccgagatctcgcagaacggcggcttcaccaccccgccgtacggctacacggccgag
cccgcctccaccgtcgtcgcctcggtgacgtcgggcgcgggcgcggggaagatctga
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