Streptomyces sp. PBH53: QR97_21680
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Entry
QR97_21680 CDS
T10303
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
stpb Streptomyces sp. PBH53
Pathway
stpb03420
Nucleotide excision repair
stpb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QR97_21680
03430 Mismatch repair
QR97_21680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stpb03400
]
QR97_21680
Enzymes [BR:
stpb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QR97_21680
DNA repair and recombination proteins [BR:
stpb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QR97_21680
MMR (mismatch excision repair)
Other MMR factors
QR97_21680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
DUF6011
Viral_helicase1
C1_1
Zn_ribbon_TiaS
Zn_Ribbon_TF
Zn_ribbon_SprT
Motif
Other DBs
NCBI-ProteinID:
AKN72048
UniProt:
A0A0H4C4Q1
LinkDB
All DBs
Position
complement(4945911..4948049)
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AA seq
712 aa
AA seq
DB search
MLEGLDPEQREVATALHGPVCVLAGAGTGKTRAITHRIAYGVRAGILHPSSVLAVTFTNR
AAGEMRGRLRQLGAQGVQARTFHSAALRQLQYFWPKAIGGSLPRLIDRKIQLVADAAAAL
GTRLDRNELRDVTAEIEWSKVTQTVPADYPYAAAKAGREAPRDPAEIAHLYAAYEDLKRD
RAVIDFEDVLLLTVAILQDRHDIAEQVRAQYQHFVVDEYQDVSPLQQRLLDLWLGDRDNL
CVVGDASQTIYSFTGATPDHLLDFRLRHPGATVVKLVRDYRSTPQVVHLANGLLTQARGR
AADHRLELVSQRPPGPDPVYTEYTDEPAEAEGAARRIRELIDAGVPAAEIAVLFRTNSQS
EIYEQALADAGVPYQLRGAERFFDRPEIRKAGIALRGAARFGGNDSLLDDVVDLPSQVRA
VLSGEGWTSAPPAGSGAVRERWESLAALVNLAHDLAAARPAATLADFVAELDERANAQHA
PTVQGVTLASLHAAKGLEWDVVFLVGIAEGMLPITYARTDEQIEEERRLLYVGVTRARER
LHLSWALSRSPGGRPNRRPSRFLDGLRPGTTPTVGRSGAGTGGGVERGSTAGTAAAPRRV
QRTPARCRVCGRTLTDAGEMKLMRCADCPSDMDEGLYERLREWRAVQAERSGQPDFCVFT
DRTLMAIAEACPESPAELARIPGVLSRKLRSYGADVLAICAGQEPAEDEGGD
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgaagggctcgaccccgagcagcgcgaggtggccaccgccctgcacggcccggtg
tgcgtcctggccggagcgggcacgggcaagacccgggcgatcacccaccgcatcgcctac
ggagtgcgcgccggcatcctgcacccgtccagcgtgctcgccgtcaccttcaccaaccgc
gccgccggcgagatgcgcggccggctccgccagctcggcgcccaaggcgtccaggcccgc
accttccactccgccgccctgcgccagctccagtacttctggccgaaagcgatcggtggc
tccctgccccggctcatcgaccgcaagatccagctcgtcgccgacgcggccgccgccctc
ggcacccggctcgaccgcaacgagctgcgcgacgtgaccgccgagatcgaatggtccaag
gtcacccagaccgtccccgccgactacccgtacgcggctgcgaaggcaggccgcgaggcc
ccccgcgaccccgccgagatcgcccacctctacgcggcctacgaggacctcaagcgcgac
cgcgcggtcatcgacttcgaagacgtcctgctgctgaccgtcgccatcctccaggaccgg
cacgacatcgccgaacaggtccgcgcgcagtaccagcacttcgtcgtggacgaataccag
gacgtcagcccgctccagcagcggctgctggacctctggctcggcgaccgtgacaacctg
tgcgtcgtcggtgacgccagccagaccatctactcgttcacgggagcaacgcccgaccac
ctcctcgacttccgcctccggcaccccggcgccaccgtcgtgaaactggtccgcgactac
cgctccaccccccaggtcgtccacctcgccaacggactgctcacccaggcccggggccgc
gccgccgaccaccggctggaactcgtctcccaacggccccccgggccggatcccgtctac
accgagtacaccgacgagcccgccgaggccgaaggcgccgcccgccgcatccgggagctg
atcgacgccggcgtccccgccgccgagatcgccgtcctgttccgcacgaactcccagtcc
gagatctacgagcaggccctcgccgacgccggggtcccctaccagctgcgcggagccgaa
cgcttcttcgaccggcccgagatccgcaaagccggcatcgccctgcgcggcgccgcccgc
ttcggcggcaacgactccctcctcgacgacgtcgtggacctcccctcccaggtgcgcgcc
gtcctctccggcgagggctggaccagcgcacccccggccggctccggcgccgtcagagaa
cgctgggaatccctggccgcactggtcaacctcgcccacgacctcgccgccgcccgcccc
gcggccaccctcgccgacttcgtggccgaactcgacgagcgcgccaacgcccagcacgcc
ccgaccgtccagggcgtcaccctcgcctccctgcacgccgccaagggcctggagtgggac
gtcgtcttcctggtcggcatcgccgagggcatgttgcccatcacctacgcccggaccgac
gagcagatcgaggaggaacgccgcctcctctacgtcggtgtcacccgcgcccgggaacgc
ctccacctctcctgggccctgtcccgctcacccggcggacgccccaaccgcaggccgagc
cggttcctcgacgggctgcgccccggcaccacccccaccgtcggccgctccggcgccggc
acgggcggcggcgtcgagcgcggcagcaccgcaggcaccgccgccgctccccggcgcgtg
cagcgcaccccggcccgctgccgggtctgcggacgcacgctcaccgacgccggcgagatg
aaactgatgcgctgcgcggactgcccctcggacatggacgaagggctctacgagcggctc
cgggagtggcgcgcggtccaggccgagcgcagcggccagccggacttctgcgtcttcacc
gaccggacactgatggccatcgccgaggcatgcccggaaagtcccgccgaactcgcccgc
atccctggcgtcctcagccgcaagctgcgcagctacggagccgacgttctggccatctgc
gcaggtcaagaacccgccgaagacgagggcggcgactga
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