Streptomyces sp. PBH53: QR97_21700
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Entry
QR97_21700 CDS
T10303
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
stpb Streptomyces sp. PBH53
Pathway
stpb03420
Nucleotide excision repair
stpb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QR97_21700
03430 Mismatch repair
QR97_21700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stpb03400
]
QR97_21700
Enzymes [BR:
stpb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QR97_21700
DNA repair and recombination proteins [BR:
stpb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QR97_21700
MMR (mismatch excision repair)
Other MMR factors
QR97_21700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AKN72052
UniProt:
A0A0H4C7P8
LinkDB
All DBs
Position
complement(4951320..4954985)
Genome browser
AA seq
1221 aa
AA seq
DB search
MSARITDPEQLKELLGIPFTPEQTACITAPPAPQVIVAGAGSGKTTVMAARVVWLVGTGQ
VAPDQVLGLTFTNKAAGELAERVRKALIKAGVTDPDALPAPGHHPATTALRADTAWPDPD
NPPGEPVISTYHAFAGRLLTDHGLRIGLESTSRLLADATRYQLAARVLREAPGPYPALTR
SFADLVSDLLALDSELAEHLVDPEELRAWDAGLLRTLEGAKLTNADLRKVPETAAARREL
ADLVQRYRAAKRQRDLLDFGDQIALSARLARIPEVGRLLREEFRVVLLDEYQDTSVAQRV
LLAGLFGGGTGHPVTAVGDPCQAIYGWRGASVANLDDFPDHFPHADGRPATRQALSENRR
SGGRLLDLANGLAAPLRAMHAGVEALRPAPGAEYDGTVRCALLPTHAEEIDWIADSLAHL
VRTGTPPGEIAVLCRTATDFAEIQGALVARDIPVEVVGLSGLLHLPEIADLVAVCEVLQD
PGANAALVRLLTGPRWRIGPRDLALLGRRARLLVAHARADATDDPDRRLAAAVEGVDPAE
VISLADALDTFLEASTDESDDGLPFSPDARVRFARLAAELRDLRRSLSDPLMDVLHRVLA
VTGLEVELSASPHALAARRRETLSNFLDVAASFAASDAEATLLAFLGFLRTAAQYEKGLD
NALPGGENTVKVLTAHKSKGLEWDVVAVPGLVTGTFPSAQGREKWTAQAKVLPHALRGDT
DTLPDVDSWDSRGMRAFHEAMKDHQHTEELRLGYVTFTRPRSLLLGSGHWWGPSQKKPRG
PSDFLRALYDHCAAGYGEIEAWADEPAEDEENPVLHTATADQVWPLPLDAAALARRRAAA
DTVLAHLDALAARPASRRPALHDPAGDEHPDWPAPPDDDPYGDDPYGDDPYGGGPYGQEA
YDEAPYDDGPYAGEPYDDDLPPEDLPYDPEPFGDLPAAGTAVPAPDTPADRDARDTRSAG
RPTVPHQAPAPQEGHSRPAEPQPAHLTPEEARTVASWDRDLDALTGELLRARQTVTDVPL
PATLTASQLLRLAEDPDGLAQELARPMPRPPQPAARRGTRFHAWVEARFEELTLPLLEPD
ELPGSDAEIADERDLEALKEAFERTEYARRTPYRVEAPFQLTLAGRVVRGRIDAVYRHGD
GDETTYEIIDWKTHRARTADPLQLAVYRLAWAEQQGVPPESVTAAFLYVRSGEVVRPERL
PDRAALERLLTGETESTHEAT
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcccgtatcaccgaccccgagcagctcaaagagctcctcggcatcccgttcacc
ccggagcagacggcctgcatcaccgcgccgcccgccccgcaggtgatcgtggccggcgcc
gggtcgggcaagaccaccgtgatggcggcccgcgtggtctggctggtcggcaccggacag
gtcgcccccgaccaggtcctcggcctgaccttcaccaacaaggccgccggcgagctggcc
gaacgcgtccgcaaggcactgatcaaggccggcgtcaccgaccccgacgccctcccggca
cccggccaccaccccgcgacgacggcgcttcgcgccgacaccgcctggccggaccccgac
aacccgccgggcgagcccgtcatctcgacgtaccacgccttcgccggccggctgctcacc
gaccacggcctgcgcatcggcctggaatccacctcgcggctgctggccgacgccacccgc
taccagctcgccgcgcgcgtgctgcgcgaggcccccggcccctaccccgcgctgacccgc
tccttcgccgacctggtcagcgacctgctcgccctcgactccgaactcgccgaacacctc
gtcgacccggaggaactgcgcgcctgggacgccggcctgctgcgcaccctcgaaggcgcc
aagctcaccaacgccgacctgcgcaaggtcccggagaccgccgcggcccgccgggagctg
gccgacctcgtccagcgctaccgggccgccaagcgccagcgggacctgctcgacttcggc
gaccagatcgccctgtcggcccgcctcgcccgcatccccgaggtgggccgcctgctgcgc
gaggagttccgcgtcgtgctcctggacgagtaccaggacacctccgtggcccagcgcgtc
ctcctggcgggcctgttcggcggcggcaccggccacccggtgaccgccgtcggcgacccc
tgccaggccatctacggctggcgcggcgcctccgtcgccaacctggacgacttccccgac
cacttcccccacgccgacggcaggcccgccacccggcaggcgctcagcgagaaccgccgc
agcggcgggcgcctgctcgacctcgccaacggcctcgccgcgcccctgcgcgccatgcac
gcgggcgtggaggccctccgcccggcccccggcgccgagtacgacggcacggtccgctgc
gccctgctgcccacccacgccgaggagatcgactggatcgccgactccctggcccacctc
gtgcgcaccggcaccccgcccggcgagatcgccgtcctgtgccggaccgcgaccgacttc
gccgagatccagggcgccctcgtcgcccgcgacatccccgtcgaggtggtcggcctctcc
gggctgctgcacctgcccgagatcgccgacctcgtcgccgtctgcgaggtcctgcaggac
cccggagccaacgccgccctggtccgcctgctcaccggaccgcgatggcgcatcggcccc
cgcgacctcgccctcctcggccgccgggcccgcctgctggtcgcccacgcgcgcgcggac
gccaccgacgacccggaccgccggctcgccgccgccgtcgagggggtcgacccggccgag
gtgatatcgctcgcggacgccctggacaccttcctggaagcgtccacggacgagagcgac
gacgggctgccgttctcgccggacgcgcgcgtgcgcttcgcccggctcgccgccgagctg
cgcgacctgcgccgctcgctgtccgacccgctgatggacgtcctgcaccgcgtcctcgcc
gtcaccggcctggaagtggagctgtcggcgtccccgcacgcgctcgccgcccgccgccgc
gagaccctgtccaacttcctggacgtcgccgcctccttcgccgcgagcgacgccgaggcc
accctgctcgccttcctcggcttcctgcgcaccgccgcccagtacgagaagggcctcgac
aacgccctgcccggcggcgagaacaccgtcaaggtgctcaccgcgcacaagtccaagggc
ctggagtgggacgtcgtcgccgtccccggactggtgacgggcaccttccccagcgcccag
ggccgcgagaagtggaccgcccaggccaaggtgctgccgcacgccctgcgcggcgacacc
gacaccctgcccgacgtcgacagctgggactcacgcggtatgagggccttccacgaggcc
atgaaggaccaccagcacaccgaggagctgcgcctcggctacgtcaccttcacccgcccc
cgctccctcctgctcggctccggccactggtgggggcccagccagaagaagccgcgcggc
ccctccgacttcctccgcgccctgtacgaccactgtgcggccgggtacggcgagatcgag
gcatgggcggacgagcccgccgaggacgaggagaacccggtcctgcacacggccaccgcc
gaccaggtgtggccgctcccgctggacgccgccgccctggcccgccgccgcgccgccgcc
gacaccgtcctcgcccacctggacgccctcgccgcccggcccgcctcccgccgcccggcc
ctgcacgaccccgccggcgacgaacacccggactggcccgcgccaccggacgacgacccg
tacggcgacgacccctacggcgacgacccctacgggggcggcccttacggccaggaggcg
tacgacgaggcgccgtacgacgacgggccgtacgccggcgagccgtacgacgacgacctc
cctccggaggaccttccgtacgaccccgagcccttcggcgacctgcccgcggccggcacc
gccgtccccgccccggacacccccgccgaccgggacgcccgggacacccggagcgccgga
cggcccaccgtcccccaccaggcccccgccccgcaggagggccactcccggcccgccgag
cctcagcccgcccacctgacccccgaggaggcccgcaccgtcgcctcttgggaccgcgac
ctggacgcgctcaccggagagctgctgcgcgcccggcagaccgtcaccgacgtcccgctg
cccgccacgctcaccgcgtcccagctgctacggctcgccgaggacccggacgggctcgca
caggaactcgcgcgccccatgccgcgccccccgcaacccgccgcgcgccggggcacccgg
ttccacgcatgggtggaagcccgcttcgaagagctgacgctgcccctgctcgaacccgac
gagctgcccggcagcgacgccgagatcgccgacgaacgcgacctggaagccctgaaggag
gccttcgaacgcaccgagtacgcccgccgcaccccctaccgggtcgaggcccccttccag
ctcaccctcgccggccgcgtcgtccggggccgcatcgacgccgtctaccggcacggcgac
ggcgacgagacgacgtacgagatcatcgactggaagacccaccgcgcccgcaccgccgac
ccgctccagctcgccgtgtaccggctggcctgggccgagcagcagggcgtaccccccgag
tcggtcacggccgccttcctgtacgtgcgcagcggcgaagtcgtacgccccgagcgactg
ccggaccgggccgcgctggaacggctgctcacgggtgagacggagagcacacacgaggcg
acctga
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