Streptomyces sp. PBH53: QR97_22285
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Entry
QR97_22285 CDS
T10303
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
stpb Streptomyces sp. PBH53
Pathway
stpb03420
Nucleotide excision repair
stpb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QR97_22285
03430 Mismatch repair
QR97_22285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stpb03400
]
QR97_22285
Enzymes [BR:
stpb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QR97_22285
DNA repair and recombination proteins [BR:
stpb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QR97_22285
MMR (mismatch excision repair)
Other MMR factors
QR97_22285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Cas_Cas4
PhoH
capSnatchArena
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AKN72138
UniProt:
A0A0H4C4Z0
LinkDB
All DBs
Position
complement(5113706..5116510)
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AA seq
934 aa
AA seq
DB search
MQLTSNQLAAIDTVDRHLGIVACAGSGKTEVIARRVVKLLRLPDVEPRHIVAFTFTDRAA
GELKQRIVSRVREELGDVRGLAELFVGTMHGYALSMLQSQVPETFKCTVLSDMQARVLID
RNSRASGLTTTQIRTKGKPTRPMKRYVNSRLYQRVLGMLREDEIDQDELPSDVLDGLSSY
RALLQRLHYLDYSEILRLAADLLLPPPSTGGPASEPVVNLRAHVRDTVRYVVVDEYQDTN
PVQEQLIAGLIQFGANLCVVGDDDQTIYQWRGSAVNNILTFTTRHSSAKTVTLNENFRSS
KAVVDLARRVAEGIDPSRRLSKSMIASGHQSYDRGDLLALSFGTPQEEAAWICDRIEWMI
GLPFTDRAGAPPRGLAYSDFAVLFRSVSGDADPLVTEMRARGIRYIIKGLSRLFQTPEVQ
AAKTCFDYIAGTVDGDAVVTAWTDARLGLRQEALKRGVKILDEARGWAEGMPWDTYTIQG
TYQRFLGEVGVREEHLTAEVGRERSELAFYNLGRFSTAIGDYERIHFLSSPPDRFATFAK
WLEYQAGDYYEESDADAGYARPDAVTIATVHQAKGMQWPAVFVPCMRRNRFPSKRQGGLG
VFHIVPEAAVNDADRYRGSEDDERRLFYVAATRAQKYLALSFSPGPGKLYQRESQFFAEA
TRNTYVLTQEAARPDESTLNRLPSTPLADTPDIVFSFSELKYLFECPYQFKLRFLYGFDS
PLQKELGYGKSLHDVMAEVHKRAVKGDIVDTTEVEALVDRHLHAPFAPEPLKEQLRNAAI
RSVHRYLRENGSRLALTEHSEQPVEVHLTPGVTVSGRIDLIRRIDTGEQSIVDFKSKERA
QADAVTRDQLHIYVAGYEELSGKRADLVEVLNLDEGSRSSREEVNDTLLKEISGKVAKAG
DQLRHNDMPRKTSWCGTCAACDFAAICRDRPSAP
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
gtgcaactgacctcgaatcagctagcagcgatcgacaccgtggacaggcacctgggaatc
gtcgcgtgcgctggatccggaaagacagaagtcatcgcccgacgggtggtgaagttgctc
cgactgcccgatgttgagccgcggcacattgtcgccttcacgttcaccgaccgggcggcc
ggagagctgaagcagcgcatcgtctctcgcgtccgagaggaacttggagatgtccgtgga
ttggccgagcttttcgttggcaccatgcacggctacgccttgagcatgctgcagtcccag
gtgccggaaacgttcaagtgcactgtcctcagcgatatgcaggctcgtgttctgatcgac
cgcaacagccgggccagcggtctgacgacaacacagatccgtaccaagggcaaaccgacc
cgcccgatgaagcggtacgtcaactcccgtctctaccaacgggttttgggcatgctccgc
gaggacgagattgaccaggacgagttgccgtcggacgtactcgacggcctgagcagttac
cgggcgttgctccagcgccttcactacctcgactacagcgagatcctccgcctcgccgcg
gacctgctgctcccgccgccgagtacgggagggccggccagcgaacccgtggtcaatctg
cgtgcccacgtgcgggacacggtccgctacgtcgtggtggacgaataccaggacaccaac
cccgtccaggagcagttgatcgccggcctcatccagttcggcgcgaacctgtgcgtcgtg
ggggacgacgaccagacgatctaccagtggcgcggaagcgcggtgaacaacatcctgacg
ttcaccacccgccacagcagcgccaagaccgtaacgctcaacgagaacttccgctcgtcc
aaggcggtggtggaccttgcacgccgggtggcggagggcatcgatccctcgcgtcggctg
agcaagtcgatgatcgccagcggccaccagagctatgaccgcggcgacctgctggccctc
tccttcggtacgccgcaggaggaggccgcgtggatctgcgaccgcatcgagtggatgatc
ggcctgcccttcaccgaccgtgccggcgcgccaccacggggcctggcgtactcggacttc
gccgtcctcttccgcagcgtgtcgggtgacgccgacccgctggtcacggagatgcgcgcc
cggggcatccgctacatcatcaagggcctgagccgcctgttccagacgcccgaggtccag
gccgccaagacctgcttcgactacatcgccggaaccgtcgacggcgacgccgtcgtgacg
gcctggacggacgcccggctcggactccgccaggaggccctgaagcgcggggtgaagatc
ctcgacgaggcccgcggctgggcggagggcatgccttgggacacctacacgatccagggc
acctaccagcgtttcctgggcgaggtcggcgtccgcgaggaacacctcactgccgaggtc
ggccgcgagcgcagcgagctcgccttctacaacctgggacgcttcagcaccgccatcggc
gactacgagcgcatccacttcctcagcagcccgcccgaccggttcgccaccttcgccaag
tggcttgagtaccaggctggcgactactacgaggagagtgacgccgacgccggatacgcc
cggcccgacgccgttacgatcgccaccgtccaccaggccaagggcatgcagtggccggcg
gtgttcgtgccctgtatgcgccgcaaccgcttccccagcaaacggcagggcggactcggt
gtgttccacatcgtcccggaggccgccgtcaacgacgccgaccgctaccgcggcagcgag
gacgacgagcgccggctcttctacgtggccgcgacccgcgcccagaagtacctcgccctc
tccttctcccccgggccgggcaagctctaccagcgggagtcgcagttcttcgccgaggcg
acccgcaacacatacgtcctgacccaggaggccgccagacccgacgaatccacgctgaac
cggctgccgtcaacccccctggccgacacaccggacatcgtgttcagcttcagcgagctc
aagtacctgttcgaatgcccgtaccagttcaagctgcggttcctgtacggcttcgactcg
ccgttgcagaaggaactcgggtacggcaagtcgctccatgacgtgatggcggaggtgcac
aagcgcgccgtgaagggcgacatcgtcgacacgacggaggtggaggcgctggtcgaccgg
cacctgcacgctccgttcgcaccggagccgctcaaggaacagctgcgcaacgcggccatc
cgctctgtccaccgctacctccgcgagaacggctctcgactggctctcaccgagcactcc
gagcagccggtggaggtgcacctcacgccgggggtgaccgtcagcggacgcatcgacctg
atccgccggatcgacaccggtgagcagtccatcgtggacttcaagtccaaggagcgcgcc
caggctgacgctgtcacccgcgatcaactgcacatctacgttgcggggtacgaagagctg
agcggcaagcgcgccgacctcgtcgaggtcctgaacctcgacgagggcagccgcagcagc
cgcgaggaggtcaacgacaccctgctgaaggagatctccggcaaggtcgccaaggccggg
gaccaactccgtcacaacgacatgccccgcaagacctcgtggtgcggcacctgcgcggcc
tgcgacttcgccgcgatctgccgggaccggcccagcgctccgtaa
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