Streptomyces sp. PBH53: QR97_24945
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Entry
QR97_24945 CDS
T10303
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
stpb Streptomyces sp. PBH53
Pathway
stpb03420
Nucleotide excision repair
stpb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QR97_24945
03430 Mismatch repair
QR97_24945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stpb03400
]
QR97_24945
Enzymes [BR:
stpb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QR97_24945
DNA repair and recombination proteins [BR:
stpb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QR97_24945
MMR (mismatch excision repair)
Other MMR factors
QR97_24945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
AKN72580
LinkDB
All DBs
Position
complement(5761015..5763522)
Genome browser
AA seq
835 aa
AA seq
DB search
MSSLFDDSFLADLQAPRGHEEEPPPPPEDDHTPEPVPDDLFGGKFDVPPDRDAYYRDGAP
RPALDSAALLEGLNENQRAAVVHAGSPLLIVAGAGSGKTRVLTHRIAYLLGERGVHPGQI
LAITFTNKAAGEMKERVEQLVGPRANAMWVMTFHSACVRILRRESKKLGFTSSFSIYDAA
DSKRLMALVCRDLDLDPKRFPPKSFSAKISNLKNELIDEEDFAAQAADGFEKTLAQAYAL
YQSRLREANALDFDDLIMTTVNLLRAFPDVAEHYRRRFRHVLVDEYQDTNHAQYALVREL
VGTGERAAGDVDVPPGEYDVPPAELCVVGDADQSIYAFRGATIRNILQFEEDYPNATTIL
LEQNYRSTQTILSAANAVIERNESRRPKNLWTNAGQGASIVGYVADTEHDEAQFVADEID
RLVDAGDARAGDVAVFYRTNAQSRVFEEVFIRVGLPYKVVGGVRFYERKEVRDVLAYLRV
LANPEDSVPLRRILNVPKRGIGERAEAMIDALSQREKISFPQALKRVDEAYGMAARSTNA
VKRFNTLMEDLRTIVESGAGPATVLEAVLERTGYLAELQASTDPQDETRIENLQELAAVA
LEFEQERGEGAAGAAAPGGTLADFLEQVALVADSDQIPDEEDGDGVITLMTLHTAKGLEF
PVVFLTGMEDGVFPHMRALGQTKELEEERRLAYVGITRARERLYLTRSAMRSAWGQPSYN
PPSRFLEEIPATHVQWKRTGAAAPVSSGPASGIAASLSSSRSRSSASGASGFATRRTAEK
PVVALAVGDRVTHDQFGLGTVVAVKGTGANAEATIDFGDAKPKRLLLRYAPVEKL
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgacgacagcttcctggcggacctccaggcccctcgcgggcacgag
gaggagcctccgccgccgcccgaggacgatcacactccggagcccgtgccggacgatctg
ttcggcgggaagttcgacgtgccaccggaccgggacgcgtactaccgcgacggcgccccg
cgccccgcgctcgactcggcggcactcctggaagggctgaacgagaaccagcgcgccgcg
gtcgtgcacgccggctccccgctgctcatcgtcgccggcgccggctccggcaagacccgc
gtgctgacccaccgcatcgcgtacctgctcggcgagcggggcgtccacccgggccagatc
ctcgcgatcaccttcaccaacaaggccgcgggcgagatgaaggagcgcgtcgagcagctc
gtcggcccgcgcgcgaacgcgatgtgggtgatgaccttccacagcgcgtgcgtgcgcatc
ctgcgccgcgagtcgaagaagctgggcttcacgtcgtcgttctcgatctacgacgccgcc
gacagcaagcgcctgatggccctggtctgccgcgacctggacctcgaccccaagcgcttc
ccgcccaagtccttcagcgccaagatcagcaacctgaagaacgagctgatcgacgaggag
gacttcgccgcccaggccgcggacggcttcgagaagaccctggcgcaggcctacgccctg
taccagtcgcggctgcgcgaggcgaacgcgctggacttcgacgacctcatcatgacgacg
gtcaacctgctgcgcgccttcccggacgtcgccgagcactaccgccgccgcttccggcac
gtcctggtggacgagtaccaggacaccaaccacgcccagtacgccctcgtccgcgagctg
gtcggcaccggcgagcgggccgccggggacgtcgacgtcccgcccggcgagtacgacgtc
ccgcccgccgaactgtgcgtcgtgggtgacgcggaccagtcgatctacgccttccggggt
gcgacgatccgcaacatcctccagttcgaggaggactacccgaacgcgacgacgatcctg
ctggagcagaactaccgctccacgcagaccatcctgtccgccgccaacgccgtcatcgag
cgcaacgagtcccgccgcccgaagaacctgtggaccaacgccggccagggcgcgagcatc
gtcgggtacgtcgccgacaccgagcacgacgaggcgcagttcgtcgccgacgagatagac
cgcctggtcgacgcgggcgacgcgcgcgcgggggacgtcgccgtcttctaccgcaccaac
gcccagtcccgtgtcttcgaagaggtcttcatccgcgtcggcctgccctacaaggtcgtc
ggcggggtccgcttctacgagcgcaaggaggtccgggacgtcctggcctacctgcgcgtc
ctcgccaacccggaggactcggtgccgctgcgccgcatcctcaacgtgcccaagcggggc
atcggcgagcgcgcggaggcgatgatcgacgccctctcccagcgggagaagatcagtttc
ccgcaggccctgaagcgcgtggacgaggcgtacggcatggccgcgcgctccaccaacgcc
gtcaagcggttcaacacgctgatggaggacctgcgcaccatcgtggagtccggcgcgggt
ccggcgaccgtcctcgaagcggtcctcgaacgcaccggctacctcgccgagttgcaggcc
tccaccgacccgcaggacgagacccggatcgagaacctccaggaactcgcggccgtggcc
ctggagttcgagcaggagcgcggggagggcgcggcgggggccgccgcgccggggggcacg
ctcgccgacttcctggagcaggtcgccctggtcgccgactccgaccagatccccgacgag
gaggacggcgacggcgtcatcacgctgatgaccctgcacaccgccaagggcctggagttc
ccggtggtgttcctgaccggcatggaggacggcgtcttcccgcacatgcgcgccctcggc
cagaccaaggagctggaggaggagcggcgcctggcgtacgtcggcatcacgcgcgcgcgg
gagcggctgtacctcacgcggtccgcgatgcgcagcgcctggggccagccgtcgtacaac
ccgccctcccgcttcctggaggaaatcccggccacccatgtgcagtggaagcggacggga
gcggcggcaccggtgtcctccgggccggcgtccgggatcgcggcctcgctgtcctcgagc
cgttcgcgctcctcggcatcgggcgcgtccgggttcgccacgcggcgtacggcggagaag
ccggtggtcgcgctggccgtcggggaccgggtcacccacgaccagttcgggctcggcacg
gtcgtcgcggtgaagggcacgggcgcgaacgcggaggcgacgatcgacttcggtgacgcc
aagccgaagcggctgctgctgcggtacgcgccggtggagaagctgtag
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