Streptomyces sp. PBH53: QR97_25025
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Entry
QR97_25025 CDS
T10303
Symbol
gabD2
Name
(GenBank) succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
stpb Streptomyces sp. PBH53
Pathway
stpb00250
Alanine, aspartate and glutamate metabolism
stpb00310
Lysine degradation
stpb00350
Tyrosine metabolism
stpb00650
Butanoate metabolism
stpb00760
Nicotinate and nicotinamide metabolism
stpb01100
Metabolic pathways
stpb01120
Microbial metabolism in diverse environments
Module
stpb_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
stpb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
QR97_25025 (gabD2)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
QR97_25025 (gabD2)
00310 Lysine degradation
QR97_25025 (gabD2)
00350 Tyrosine metabolism
QR97_25025 (gabD2)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
QR97_25025 (gabD2)
Enzymes [BR:
stpb01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
QR97_25025 (gabD2)
1.2.1.20 glutarate-semialdehyde dehydrogenase
QR97_25025 (gabD2)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
QR97_25025 (gabD2)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AKN72594
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Position
complement(5780084..5781697)
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AA seq
537 aa
AA seq
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MTDTQAPDIAGTNPLAPAPEGARTAADVVTPELVARLTKGVVGSGRTANHTPFTGEKLAD
LPESAPEDVGKAFEAARAAQAVWAKTPVRQRAAVLLRFHDLLLDRQAEVLDLVQLETGKA
RLHAHEEVQAVAVAARHYGRRAAAYLRPKRHAGAIPALTKVTELRHPRGVVGQIAPWNYP
LELSVGDALPAFVAGNAVVMKPDTETCLTALWARDLLIEAGLPDGVFQIVLGEGPVVGPE
VVKHADYVSFTGSTRTGREVAVGAASRLVGVSLELGGKNAMLVLDDADIEKAAAGAVRAC
FSSAGQLCISIERLYVHESVADAFLERFAARTRAMRLGNSLAYGADMGSLVGERQLKTVE
RHVQEAVAKGAKVVAGGAARPDIGPYFFEPTILDGVAESMAVCEEETFGPVVSVYRFTSD
EEAVDRANATPYGLNASVWTTNARRGRDVAARLRTGTVNVNEGYAPAYGSVQSPMGGMKD
SGLGRRHGSEGILKYTEAQTVAQQRLLPMAPSLGMDDESYARFMSTSLKLMKAFRFR
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgacggacacgcaggccccggacatcgccggtaccaacccgctcgcgcccgcccccgaa
ggcgcccgcaccgccgccgacgtggtcaccccggagttggtggcccggctcaccaagggc
gtcgtcggctccggccgcaccgccaaccacaccccgttcaccggcgagaaactggccgac
ctgcccgagtccgcccccgaggacgtcggcaaggccttcgaggcggcccgcgccgcccag
gccgtgtgggcgaagaccccggtccggcagcgcgccgccgtcctgctccgcttccacgac
ctgctgctggaccggcaggccgaagtcctcgacctggtccagctggagaccggcaaggcc
cgcctgcacgcgcacgaggaggtgcaggccgtcgccgtcgcggcccgccactacggccgc
cgggccgccgcgtacctgaggccgaagcggcacgcgggcgccataccggccctgacgaag
gtcaccgaactccgccacccgcgcggggtcgtgggccagatcgccccctggaactacccg
ctggagctgtccgtcggcgacgccctgcccgccttcgtcgccggcaacgccgtcgtgatg
aagccggacaccgagacctgcctcaccgcgctgtgggcccgcgacctgctcatcgaggcc
ggcctgcccgacggtgtcttccagatcgtcctcggcgagggccccgtcgtcggccccgag
gtggtcaagcacgccgactacgtctccttcaccggctccacccgcaccggtcgcgaggtc
gccgtcggcgccgcctcccgcctggtcggcgtctccctcgaactcggcggcaagaacgcc
atgctggtgctggacgacgccgacatcgagaaggccgccgccggtgccgtacgcgcctgc
ttctcctccgccggccagctctgcatctccatcgagcggctctacgtccacgagtccgtc
gccgacgccttcctggagcggttcgccgcccgcacccgggccatgcgcctcggcaactcc
ctcgcctacggcgccgacatgggctcactggtcggcgaacgccagctgaagaccgtcgaa
cggcatgtgcaggaggccgtcgccaagggcgcgaaggtcgtcgcgggcggggcggcccgc
cccgacatcggcccctacttcttcgagcccaccatcctggacggcgtggcggagtccatg
gccgtctgcgaggaggagaccttcggcccggtcgtctcggtctaccgcttcacgagcgac
gaggaggccgtcgaccgcgccaacgccacgccgtacggcctgaatgcctcggtgtggacg
acgaacgcccgccgcggccgggacgtcgcggcccgcctgcgcaccggcacggtcaacgtc
aacgagggctacgcccccgcctacggcagcgtccagtccccgatgggcggcatgaaggac
tccggcctcggccgccgccacggctccgagggcatcctcaagtacaccgaggcccagacg
gtggcccagcagcggctgctgccgatggcaccgtcgctggggatggacgacgagtcctac
gcccgcttcatgagcacgagtctcaagctcatgaaggccttccggttccgctag
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