Streptomyces sp. PBH53: QR97_25105
Help
Entry
QR97_25105 CDS
T10303
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
stpb Streptomyces sp. PBH53
Pathway
stpb00040
Pentose and glucuronate interconversions
stpb01100
Metabolic pathways
stpb02024
Quorum sensing
Brite
Enzymes [BR:
stpb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
QR97_25105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
AKN72610
UniProt:
A0A0H4C743
LinkDB
All DBs
Position
5796389..5797723
Genome browser
AA seq
444 aa
AA seq
DB search
MRTQRCHGRVIAVAAGCTALVLAVTGTASGSGSASAQSGARAGLDRQVLPARDGWAAYGT
GTTGGAAADSAHVYTVTTWEQFKAALADGGSAPRIVRVKGMIDADGPGCASFAVPGYDFG
AYLKTYDPAVWGRTENLDAEPDGSPEGLRRASAARQAAFVKAAVPADTTIVGIGRDAGFQ
GASLQIKGVDNVIVRNLTFESPLDCFPQWDPTDTADGNWNSEYDSAVVHGSTHVWLDHNT
FTDGEHPDSTLPSYYGRLYQQHDGELDIVKGADYVTASWNVFEDHDKTILVGNSDSASTA
AVDRGHLKATFHHNLFRNLVERAPRIRFGQVDSYNNHVVAGAGHSYTYGIGMESQLVAEH
NAFTLPDGVPAGTILKKWKDAPVTAADNHVNGRPTDLIAVHNAQVPGEILRSGAGWTPVL
RTRVDRPQAVPGLVGHRAGAGRLR
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtacacagagatgtcatggccgtgtcatagcagtggcggccggctgcacggccctc
gtcctcgccgtcaccggtaccgcctccggctccggctccgcttccgcgcagtccggtgcc
cgcgccggcctcgaccggcaggtgctgcccgcccgggacggctgggcggcgtacggcacc
gggacgaccggcggggccgccgccgactccgcgcacgtgtacaccgtcaccacctgggag
cagttcaaggccgccctcgcggacggcggcagcgcgccccggatcgtccgggtgaagggc
atgatcgacgccgacgggccgggctgcgcctccttcgccgtgcccgggtacgacttcggc
gcctacctgaagacctacgacccggcggtgtggggccgtaccgagaacctcgacgccgag
cccgacggcagccccgaggggctgcgccgcgcctccgccgcgcgccaggccgccttcgtc
aaggccgccgtcccggccgacacgaccatcgtcggcatcggccgcgacgccggcttccag
ggcgccagcctgcagatcaagggcgtcgacaacgtcatcgtccgcaacctgaccttcgag
agccccctcgactgcttcccgcagtgggacccgaccgacaccgccgacggcaactggaac
tccgagtacgacagcgccgtcgtccacggctcgacccatgtgtggctggaccacaacacc
ttcaccgacggcgagcacccggacagcaccctgccgtcgtactacggccggctctaccag
cagcacgacggcgagctggacatcgtcaagggcgccgactacgtcaccgcctcctggaac
gtcttcgaggaccacgacaagacgatcctcgtcggcaacagcgacagcgcgtccacggcc
gccgtcgaccgcgggcatctgaaggccaccttccaccacaacctgttccggaacctggtc
gagcgcgccccgcggatccgcttcgggcaggtggactcgtacaacaaccacgtcgtcgcc
ggcgccggtcactcctacacctacggcatcggcatggagtcgcagctggtcgccgagcac
aacgcgttcaccctgccggacggtgtcccggcgggcacgatcctgaagaagtggaaggac
gcgccggtcaccgccgccgacaaccacgtcaacggcaggccgacggacctcatcgccgtg
cacaacgcgcaggtgcccggcgagatcctccgctccggggccggctggacgccggtgctg
cggacccgggtggaccggccgcaggccgtccccggcctcgtcggccaccgcgcgggcgcc
ggacgcctgcgctga
DBGET
integrated database retrieval system
