Streptomyces sp. PBH53: QR97_31115
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Entry
QR97_31115 CDS
T10303
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
stpb Streptomyces sp. PBH53
Brite
KEGG Orthology (KO) [BR:
stpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stpb03021
]
QR97_31115
Transcription machinery [BR:
stpb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QR97_31115
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
KORA
MarR_2
HTH_Crp_2
HTH_23
HTH_37
HTH_3
HTH_Tnp_4
Trp_repressor
DUF722
Cro
HTH_24
HTH_31
Motif
Other DBs
NCBI-ProteinID:
AKN73619
LinkDB
All DBs
Position
complement(7172387..7173232)
Genome browser
AA seq
281 aa
AA seq
DB search
MTTVTAAKTDTTASGLPEVAIPSQVTPKDARQLTRLFFDQLAVLEEGTPEYQYARNTLIE
MNMSLVRYAAGRFRSRGPEEMEDIVQVGMIGLIKAIDRFELAREVEFTSFAIPYIVGEIK
RFFRDTTWAVHVPRRLQEARVQLARATEELRSRLGRTPTVKELSELMSLPEDEVREARLA
SNGYSSSSLDATINGSEDGECALQDFIGTDDRALELVEDFHALAPMIAALDERDRHIIHM
RFVEELTQAQIGERLGVSQMHVSRLLSRCLARLREGMLTTR
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagtgactgcggcgaaaacggacacgaccgcgagtggtctgccggaggtcgcc
attccctcccaggtgacaccgaaggacgcccgacagctgacgcgcctgttcttcgaccag
ctcgcggtccttgaggagggcacccccgagtaccagtacgcgcgcaacacgctgatcgag
atgaacatgtccctggtccgctacgcggccggccggttccgcagccgcggtccggaggag
atggaggacatcgtccaggtcggcatgatcggcctgatcaaggcgatcgaccggttcgag
ctcgcccgggaagtggagttcacctccttcgccatcccctacatcgtcggcgagatcaag
cgcttcttccgcgacaccacctgggccgtgcacgtgccacgccgcctgcaggaggcgcgc
gtccagctggcccgcgccaccgaagagctgcgcagccgtctggggcgcacaccgacggtg
aaggaactgtcggagctgatgagcctgccggaggatgaggtgcgcgaggcccgcctggct
tccaacggctacagctcctcctccctggacgccacgatcaacggcagcgaggacggcgaa
tgtgccctgcaggatttcatcgggactgacgaccgggccctggagctcgtggaggacttc
cacgcactcgccccgatgatcgccgccctggatgaacgggatcggcacatcattcatatg
cggttcgtggaagaactcacccaggcacagatcggcgaacgcctgggcgtctcccagatg
cacgtttcccgcctgctctcgcgctgcctcgcccggctgcgcgaaggcatgctcaccacc
cgctga
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