Streptomyces sp. PBH53: QR97_37230
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Entry
QR97_37230 CDS
T10303
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
stpb Streptomyces sp. PBH53
Pathway
stpb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
stpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QR97_37230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stpb03400
]
QR97_37230
Enzymes [BR:
stpb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
QR97_37230
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
QR97_37230
DNA repair and recombination proteins [BR:
stpb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QR97_37230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_Ribbon_TF
Zn_ribbon_IS1595
Zn_ribbon_8
Zn_ribbon_6
Zn_ribbon_recom
DZR
Zn_ribbon_TFIIB
Auto_anti-p27
zf-C2HC_3
zf-C2H2_FBX41
Zn_ribbon_InsA
Zn_ribbon_SprT
Motif
Other DBs
NCBI-ProteinID:
AKN74618
UniProt:
A0A0H4CBX2
LinkDB
All DBs
Position
complement(8583345..8584136)
Genome browser
AA seq
263 aa
AA seq
DB search
MPELPDVEGFRRVLESCAQGRVVRRVDVRDAGVLRGVSARRLRGALEGRRFGKPERHGKW
LLARTGDGPTLMLHFGMTGRLICADCGDALDPHDRVLFTLAGGRQVRYRDQRKLQGLWLA
DDDSAVARLLERQGPDAMAVSREEFETALAGRRGHIKTALTDQSVLAGLGNLLADEILWL
AGLRPDSRASDLSPADRRRLYTQMRRTLRAAVAAGCVPPRDSWLTGHRDDPDPVCPRCGS
HLRRTRMSGRGTVWCPRCQSTES
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgagctgcccgacgtcgagggattccggagggtgctggagtcctgtgcgcaagga
cgggtcgtccgacgcgtggacgtgcgcgacgcgggcgtcctgcgcggcgtcagcgcgcga
cggctgcgcggtgccttggaaggccggcggttcggcaagccggagcggcacgggaagtgg
ctgctcgcccgcaccggcgacgggccgactctcatgctccacttcggcatgaccggccgg
ttgatctgcgccgattgcggcgatgccctggatccccacgaccgcgtcctgttcaccttg
gcgggcggccggcaggtgcgctaccgcgaccagcgcaaactccagggcctctggctggcc
gacgacgactccgccgtcgcccggctcctggagcgccaggggcccgacgcgatggcggtg
agccgcgaggagttcgagaccgcgctggccgggcgccgcggccacatcaagaccgccctc
accgaccagtccgtcctggccggcctcggcaacctgctcgccgacgagatcctgtggctc
gccgggctgcgccccgacagccgggcgagcgacctcagcccggccgaccgccggcgcctg
tacacccagatgcgccgcacgctccgcgccgcggtcgccgccggctgcgtcccgccgcgc
gactcctggctcaccggccaccgcgacgaccccgaccctgtctgtccccgctgcggctcc
cacctgcgccggacccggatgtccggccgcggcacggtgtggtgcccgcgatgccagtcg
acggagtcctga
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