Streptomyces sp. JL1001: R1Y80_03835
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Entry
R1Y80_03835 CDS
T11759
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
stpj Streptomyces sp. JL1001
Brite
KEGG Orthology (KO) [BR:
stpj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stpj03400
]
R1Y80_03835
DNA repair and recombination proteins [BR:
stpj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
R1Y80_03835
Archaeal homologous recombinant proteins
R1Y80_03835
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Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
NTP_transf_3
Motif
Other DBs
NCBI-ProteinID:
XCN12821
UniProt:
A0AAU8K8Y9
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Position
complement(846125..847294)
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AA seq
389 aa
AA seq
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MRLLHTSDWHLGRSFHRVSLLDAQSAYLDHLVATVREREVDVVLVAGDVYDRAVPPLTAV
ELFDRALHRLAAAGVPTVMISGNHDSARRLGVGAGLFERAGIHLRTDPEGCATPVVLADD
HGDVAFYGLPYLEPALVKDALGAAKAGHEAVLTAAMDRVRADLATRPAGTRSVVLAHAFV
AGGEPSDSERDITVGGVAAVPAGVFDGVDYAALGHLHGSQRVTERVRYSGSPLAYSFSEA
DHRKTMWLVDLDAHGNIAAEERVDCPVERPLARLRGRLDTLLEDPALDRHEHAWVEATLT
DPVRPAEPMARLARRFPHTLSLVFDPERPPEDPLASYAQRLKGRDDHQIAEDFVAHVRGG
SGPNDLERTVLRGAFDDVRVDETVREVSR
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
gtgaggctcctgcacacctcggactggcatctgggccggtccttccaccgcgtctccctg
ctggacgcccagtccgcctacctcgaccacctcgtggcgacggtccgggagcgcgaggtg
gacgtggtcctcgtcgccggcgacgtctacgaccgggccgtacccccgctcaccgccgtc
gagctgttcgaccgggcgctgcaccggctcgccgccgccggcgtccccaccgtcatgatc
tccggcaaccacgactcggcccgccggctcggcgtcggcgcggggctcttcgaacgcgcc
gggatccatctgcggaccgatcccgagggctgcgccacccccgtcgtgctcgccgacgac
cacggcgacgtggcgttctacgggctgccctacctggaacccgccctggtcaaggacgcc
ctgggggcggccaaggccggtcacgaggcggtcctcaccgccgccatggaccgggtgcgc
gccgacctcgccacccgccccgccggaacccgctccgtcgtcctcgcgcacgccttcgtg
gcgggcggcgagcccagcgacagcgaacgcgacatcaccgtcggcggggtcgccgccgtc
cccgccggggtcttcgacggcgtcgactacgcggccctcggccatctccacggctcccag
cgggtcacggaacgggtccgctactccggctcgccgctcgcctactccttctccgaggcc
gaccaccgcaagaccatgtggctcgtcgacctcgacgcccacgggaacatcgccgccgag
gaacgcgtcgactgccccgtcgagcggcccctcgcccggctcaggggccgcctcgacacc
ctcctggaggaccccgccctggaccgccacgagcacgcctgggtcgaggccaccctcacc
gacccggtacgccccgccgagcccatggcccgcctcgcccggcgcttcccgcacaccctc
agcctcgtcttcgaccccgaacggccccccgaggatccgctcgcctcctacgcccagcgc
ctcaagggccgcgacgaccaccagatcgccgaggacttcgtcgcccacgtccgcggcggc
agcggcccgaacgacctcgaacgcaccgtgctgcgcggcgcgttcgacgacgtccgggtg
gacgagaccgtgcgcgaggtgtcccggtga
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