Streptomyces sp. JL1001: R1Y80_04900
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Entry
R1Y80_04900 CDS
T11759
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
stpj Streptomyces sp. JL1001
Pathway
stpj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stpj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
R1Y80_04900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stpj03400
]
R1Y80_04900
Enzymes [BR:
stpj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R1Y80_04900
DNA repair and recombination proteins [BR:
stpj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
R1Y80_04900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_C
PriA_3primeBD
DUF1344
Motif
Other DBs
NCBI-ProteinID:
XCN13016
UniProt:
A0AAU8K9H1
LinkDB
All DBs
Position
complement(1120296..1122440)
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AA seq
714 aa
AA seq
DB search
MSSENEQSAEPGAGPPEQLALIRETVRRAKVPRAKPRTWRGAPLADDLPVARVLVNKGVL
HLDQYFDYAVPQELDADAQPGVRVRVRFGAGGRNVQGGRREGGGLIDGFIVERRADSDYQ
GALAALASVVSPEPVLGPELLALCRAVADRYAGSLADVLQLAVPPRNGRAEAKPSPEPLP
PPPPPDPGTWERYGQGPAFLRALAEGGAPRAVWTALPGPHWPAEIAGAVAATLSSGRGAL
VVVPDGRAAARVDAALTETLGAGRHALLTAESGPEKRYRQWLAVRRGSVRAVVGTRAAMF
APVRDLGLVVVWDDGDSSHSDDNAPFPHVREVLELRAAQGRCGFLLGGTSCTVEAAQLVE
SGWALPLLADRERLRRAAPLIRTVGDGELARDGAARSARLPSLAWGAVRDGLRTGPVLIQ
VPRRGYAPRLACERCRTPARCRHCAGPLEAPDQQDLNCAWCGQAERAWSCAECGSTRLRA
RIVGARRTAEELGRAFPAVPVRTSGRDHILDAVPDAPALVVSTPGAEPVAEGGYAAALLL
DGWAMLGRPDLRAGEEALRRWLAASALVRGQEEGGTVVVVAEPTERAVQALVRWDPAGFA
RRELADRAELGFPPVSRMASVTGPPGALTAFLQNAGLPPEAEILGPVPASSAAPGRARRP
GDAPPGETWERALVRVVPGRGAALARALKTALAARTAKGANDPVRIRIDPPDIG
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcgagaacgagcagtccgccgaaccgggtgccgggccgccggagcagcttgcg
ctgatccgggagaccgtgcgccgggcgaaggtgccgcgcgccaagccgcggacctggcgc
ggcgcacccctcgccgacgacctgcccgtcgcccgcgtcctggtcaacaagggcgtcctc
cacctcgaccagtatttcgactacgccgtccctcaggagctggacgccgacgcacagccg
ggcgtccgggtgcgggtccggttcggggccggcgggcgcaacgtccagggagggcggcgc
gagggcggcggcctgatcgacggcttcatcgtcgagcgccgcgccgactccgactaccag
ggcgcgctggccgccctcgcctccgtggtctccccggagccggtcctcggccccgagctg
ctcgccctctgccgcgccgtcgccgaccggtacgcgggcagcctcgccgacgtcctccag
ctcgccgtcccgccgcgcaacggccgcgccgaggccaagccctccccggagccgctgccc
ccgcccccgcccccggacccgggcacctgggagcggtacggtcagggcccggccttcctg
cgagccctggcagaaggcggcgccccgcgcgccgtgtggaccgccctgcccggaccgcac
tggcccgcggagatcgccggagccgtcgcggcgacgctctcctccgggcgcggcgccctc
gtcgtcgtcccggacgggcgggccgccgcacgggtcgacgcggctctgaccgagacgctc
ggcgcgggtcggcacgccctgctgaccgccgaatccggccccgagaagcgctaccgccag
tggctcgcggtacgccggggctcggtgcgggcggtcgtgggcacccgggccgccatgttc
gcccccgtccgcgacctcggcctcgtggtcgtctgggacgacggcgactccagccacagc
gacgacaacgcccccttcccccatgtccgcgaggtcctggagctgcgggcggcccagggc
cgctgcggcttcctgctcggcggcaccagctgcacggtcgaggccgcccagctcgtggag
agcggctgggcgctgcccctcctggcggaccgcgaacggttgcgccgggccgcgcccctc
atccgtacggtcggcgacggcgagctggcccgggacggggccgcccgctccgcccggctg
cccagcctcgcctggggggccgtgcgcgacggcctgcgcaccgggccggtgctgatccag
gtgccccggcggggttacgccccccgcctcgcctgcgaacgctgccgcacccccgcccgc
tgccggcactgcgcaggccccctggaggcgccggaccagcaggatctgaactgcgcctgg
tgcgggcaggccgagcgggcctggagctgcgcggagtgcggctccacccggctgcgcgcc
cggatcgtcggcgcccgccgcaccgcggaggagctgggccgggcctttcccgccgtgccc
gtccgcacctccgggcgcgaccacatcctcgacgcggtgcccgacgccccggccctggtg
gtctccacgcccggcgcggaacccgtcgccgagggcgggtacgcggcggccctgctcctg
gacggctgggccatgctcggccggcccgatctgcgcgcgggggaggaggcgctgcgccgg
tggctggcggcttcggcgctggtgcgggggcaggaggagggcggcacggtggtggtcgtg
gccgagccgacggagcgtgcggtgcaggcgctggtccgctgggatccggcggggttcgcc
cggcgggagctggcggaccgcgccgagctgggcttcccgccggtctcccggatggcctcg
gtgaccggcccgcccggggctctgaccgcgttcctccagaacgccgggctgccgccggag
gccgagatcctgggaccggtgccggcctcctcggccgcgcccggaagggcccgcagaccg
ggagacgcgccaccgggcgagacctgggagcgggccctggtccgggtggtcccggggcgc
ggggccgcgctcgcccgtgccttgaagacggcgctcgcggcccgcacggccaagggcgcg
aacgacccggtacgcatcaggatcgacccgccggacatcggctga
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