Streptomyces sp. JL1001: R1Y80_05165
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Entry
R1Y80_05165 CDS
T11759
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
stpj Streptomyces sp. JL1001
Pathway
stpj00750
Vitamin B6 metabolism
stpj01100
Metabolic pathways
stpj01240
Biosynthesis of cofactors
Module
stpj_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
stpj00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
R1Y80_05165 (pdxS)
Enzymes [BR:
stpj01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
R1Y80_05165 (pdxS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
His_biosynth
IGPS
TetR_C_27
NanE
NMO
Motif
Other DBs
NCBI-ProteinID:
XCN13066
LinkDB
All DBs
Position
complement(1178084..1179004)
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AA seq
306 aa
AA seq
DB search
MSTLPSTPQSAESPATGTARVKRGMAEQLKGGVIMDVVDAEQAKIAEDAGAVAVMALERV
PADIRKDGGVARMSDPNMIEEIIGAVSIPVMAKSRIGHFVEAQVLQSLGVDYIDESEVLT
PADEVNHSDKFAFTTPFVCGATNLGEALRRIAEGAAMIRSKGEAGTGNVVEAVRHLRQIK
NEIARLRGFDNNELYAAAKDLRAPYELVKEVAELGKLPVVLFSAGGVATPADAALMRQLG
AEGVFVGSGIFKSGDPAKRAAAIVKATTFYDDPKVIADASRNLGEAMVGINCDTLPESER
YANRGW
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
gtgtccacgcttcccagcaccccgcagtccgccgagtcccccgccaccggcaccgcccgc
gtcaagcgcggcatggccgagcagctcaagggcggcgtgatcatggacgtcgtcgacgcc
gagcaggcgaagatcgccgaggacgcgggcgccgtggccgtcatggccctggagcgggtc
cccgccgacatccgcaaggacggcggcgtggcccggatgtccgaccccaacatgatcgag
gagatcatcggggccgtctccatccccgtcatggccaagtcccgcatcggccacttcgtc
gaggcccaggtcctccagtccctcggcgtcgactacatcgacgagtccgaggtcctcacc
ccggccgacgaggtgaaccacagcgacaagttcgccttcaccacccccttcgtctgcggc
gccaccaacctgggcgaggccctgcgccgcatcgccgagggcgcggccatgatccgctcg
aagggcgaggccggcaccggcaacgtcgtcgaggccgtccgccacctgcgccagatcaag
aacgagatcgcacgtctgcgcggcttcgacaacaacgagctgtacgccgcagccaaggac
ctccgcgccccctacgagctggtcaaggaggtcgccgagctcggcaagctgcccgtcgtg
ctgttctccgccggtggtgtggccaccccggccgacgccgcgctgatgcgccagctcggc
gccgagggcgtcttcgtcggctccggcatcttcaagtccggcgacccggccaagcgcgcc
gccgccatcgtgaaggccaccaccttctacgacgacccgaaggtcatcgcggacgcctcc
cgcaacctgggcgaggccatggtcggcatcaactgcgacaccctgcccgagtccgagcgc
tacgccaaccgcggctggtaa
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