Streptomyces sp. JL1001: R1Y80_11845
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Entry
R1Y80_11845 CDS
T11759
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
stpj Streptomyces sp. JL1001
Pathway
stpj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stpj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
R1Y80_11845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stpj03400
]
R1Y80_11845
Enzymes [BR:
stpj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
R1Y80_11845
DNA repair and recombination proteins [BR:
stpj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
R1Y80_11845
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
HHH_5
AAA_11
AAA_22
TraI_hel_assoc_N
PIF1
NAT10_TcmA_helicase
PhoH
NPHP3_N
AAA_16
nSTAND3
UvrD_C
HTH_IclR
DEAD
AAA
DUF87
TrwB_AAD_bind
SLFN-g3_helicase
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
XCN14306
UniProt:
A0AAU8KEU2
LinkDB
All DBs
Position
complement(2619094..2621319)
Genome browser
AA seq
741 aa
AA seq
DB search
MSNMAVLEGVLERITYANEENGYTVARVDTGRGAGDLLTVVGALLGAQVGESLRMEGRWG
SHSQYGKQFTVENYTTVLPATIQGIRRYLGSGLIKGIGPVMADRITTHFGVDTLDIIERE
PKRLVEVPGLGPKRTKMIAAAWEEQKAIKEVMVFLQGVGVSTSIAVRIYKKYEDASISVV
KNQPYRLAADVWGIGFLTADKIAQAVGIPHDSPERVKAGLQYALSQSSDQGHCYLPEERL
IADGVKLLQVDTGLVIECLAELAADPEGVVREKVPSPEGGEPITAVYLVPFHRAELSLAG
QVRRLLRTEEDRMPAFRDVDWGKALAWLATRTGASLAPEQEEAVRLALSRKVAVLTGGPG
CGKSFTVRSIVELARAKRAKVVLAAPTGRAAKRLSELTGAEASTVHRLLELKPGGDAAYD
RDRPLDADLVVVDEASMLDLLLANKLVKAVAPGAHLLLVGDVDQLPSVGAGEVLSDLLAE
GGPVPAVRLTRIFRQAQQSGVVTNAHRINAGQPPLTEGLSDFFLFVEDETEDAGKLAVDV
AARRIPAKFGLNARRDVQVLAPMHRGPAGAGHLNGLLQQAITPGRPDLPEKRFGGRVFRV
GDKVTQIRNNYDKGENGVFNGTVGIVTGLDVDEQKLTVRTDEDEEIGYDFDELDELAHAY
AMTIHRSQGSEYPAVVIPVTTSAWMMLQRNLLYTAVTRAKKLVVLVGSRKAIGQAVRTVS
AGRRCTALDFRLRGGSGEDFS
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacatggccgtcctcgaaggggtcctggagcggatcacctacgccaacgaggag
aacgggtacacggtcgcccgcgtcgacaccgggcgcggagccggcgacctcctcaccgtg
gtcggtgcgctgctcggcgcgcaggtcggtgagtcgctgcggatggagggccgctggggc
tcgcactcgcagtacggcaagcagttcaccgtggagaactacaccaccgtgctgcccgcc
accatccagggcatccgccgctatctgggctccgggctgatcaagggcatcgggccggtg
atggccgaccggatcaccacccacttcggcgtcgacaccctcgacatcatcgagcgggaa
ccgaagcggctcgtcgaggtccccggcctcggccccaagcgcacgaagatgatcgcggcg
gcctgggaggaacagaaggcgatcaaggaggtcatggtcttcctccagggcgtcggcgtc
tccacctccatcgccgtccgcatctacaagaagtacgaggacgcctcgatctccgtcgtg
aagaaccagccctaccggctggccgccgacgtctggggcatcggcttcctcaccgcggac
aagatcgcccaggccgtcggcatcccgcacgacagccccgagcgggtcaaggccggactg
cagtacgccctgtcccagtcctccgaccaggggcactgctatctcccggaggaacggctc
atcgcggacggcgtcaagctcctccaggtcgacaccgggctggtcatcgagtgcctggcc
gagctggccgccgatccggagggcgtcgtacgggagaaggtgccgtcccccgagggcggc
gagccgatcacggcggtctacctcgtcccgttccaccgggccgagctgtccctcgccggg
caggtgcggcggctgctgcggacggaggaagaccggatgccggccttccgggacgtcgac
tggggcaaggcgctggcctggctcgccacgcgtacgggggcctcgctggcgcccgagcag
gaggaggccgtacgtctcgcgctcagccgcaaggtggccgtcctgaccggcggccccggc
tgcggcaagtcgttcaccgtccgctcgatcgtcgagctggcccgggcgaagagggccaag
gtggtgctcgccgcccccaccgggcgcgccgccaaacgcctctccgagctgaccggggcc
gaggcctccaccgtgcaccggctgctggagctgaagccgggcggggacgccgcgtacgac
cgggaccgtccgctggacgccgatctggtcgtcgtcgacgaggcgtcgatgctcgatctg
ctgctcgccaacaagctcgtgaaggcggtggcacccggtgcccacctcctcctggtgggc
gatgtcgaccagctgccctcggtcggcgcgggggaggtgctgagcgatctgctcgcggag
ggcggtccggtccccgccgtccggctcacccggatcttccgccaggcccagcagtccggc
gtggtcaccaacgcacaccgcatcaacgccggacagccacccctcaccgaggggctgagc
gacttcttcctcttcgtggaggacgagacggaggacgcgggcaagctcgccgtcgatgtc
gcggcccgccgcattccggccaagttcggtctcaacgcccgccgcgacgtgcaggtcctc
gccccgatgcaccggggcccggccggcgcgggccatctgaacgggctgctccagcaggcc
atcaccccgggccgccccgacctccccgagaagcggttcggcggccgggtcttccgggtc
ggcgacaaggtcacccagatccgcaacaactacgacaagggcgagaacggcgtcttcaac
ggcaccgtcggcatcgtcaccggcctcgacgtggacgagcagaagctcaccgtccgcacc
gacgaggacgaggagatcggctacgacttcgacgagctggacgagctggcccacgcgtac
gccatgacgatccaccgctcccagggcagcgagtatccggccgtcgtcatccccgtcacc
accagcgcctggatgatgctccagcgcaacctgctctacacggccgtcacgagggccaag
aagctcgtcgtgctcgtcgggtcccgtaaggcgatcggccaggcggtccgcacggtttcc
gcaggcaggcgttgtacggcactggatttccggcttcggggcggctccggcgaagacttc
tcgtga
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integrated database retrieval system
