Streptomyces sp. JL1001: R1Y80_27440
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Entry
R1Y80_27440 CDS
T11759
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
stpj Streptomyces sp. JL1001
Brite
KEGG Orthology (KO) [BR:
stpj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stpj03032
]
R1Y80_27440
03036 Chromosome and associated proteins [BR:
stpj03036
]
R1Y80_27440
03400 DNA repair and recombination proteins [BR:
stpj03400
]
R1Y80_27440
DNA replication proteins [BR:
stpj03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
R1Y80_27440
Chromosome and associated proteins [BR:
stpj03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
R1Y80_27440
DNA repair and recombination proteins [BR:
stpj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
R1Y80_27440
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
Motif
Other DBs
NCBI-ProteinID:
XCN17133
UniProt:
A0AAU8KMT9
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All DBs
Position
6053114..6053767
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AA seq
217 aa
AA seq
DB search
MNKAQLVEAIADKVGGRQQAADAVDAVLDAIVRAVVAGDRVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPKNDVAVKKAPKGSLSGGSSAARTTV
KAAAAKKSAAKKATAKKATAKKTTAAKTTAAKKTTAKKTTATAKKTSAAAKKATPAKKAT
ATAKKTAPAKKATAKKAPAKKTTARKTTAKKATARKK
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggcgcagctcgtagaagcgattgccgacaaggtcggcggccgtcagcaggcc
gcggacgccgtcgacgcggtactcgacgcgatcgtccgtgccgttgtcgccggggaccgt
gtctcggtcaccggcttcggctcgttcgagaaggtcgaccgccccgcccggtacgcccgc
aacccgcagacgggtgagcgcgtccgggtcaagaagacctcggtgccccgcttccgtgcg
ggccagggcttcaaggacctggtgagcggctcgaagaagctccccaagaacgacgtggcc
gtcaagaaggcccccaagggcagcctctcgggcggatcctccgccgcccgtacgacggtg
aaggccgccgccgccaagaagtcggccgccaagaaggccaccgcgaagaaggccacggcc
aagaagacgacggcggcgaagaccaccgccgcgaagaagaccacggccaagaagacgacc
gcgacggcgaagaagacgtccgcggccgcgaagaaggccaccccggccaagaaggccacg
gccaccgccaagaagaccgcgcccgccaagaaggccacggcgaagaaggcgcccgcgaag
aagaccacggcgcgcaagaccacggccaagaaggccaccgcacgcaagaagtga
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