Streptomyces sp. JL1001: R1Y80_30575
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Entry
R1Y80_30575 CDS
T11759
Name
(GenBank) AlkA N-terminal domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
stpj Streptomyces sp. JL1001
Pathway
stpj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
stpj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
R1Y80_30575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stpj03000
]
R1Y80_30575
03400 DNA repair and recombination proteins [BR:
stpj03400
]
R1Y80_30575
Enzymes [BR:
stpj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
R1Y80_30575
Transcription factors [BR:
stpj03000
]
Prokaryotic type
Helix-turn-helix
AraC family
R1Y80_30575
DNA repair and recombination proteins [BR:
stpj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
R1Y80_30575
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
DUF6233
Motif
Other DBs
NCBI-ProteinID:
XCN17714
UniProt:
A0AAU8KRS6
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All DBs
Position
6829898..6831280
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AA seq
460 aa
AA seq
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MDDRTRYEAVSSRDARFDGAFFFAVVTTGIYCRPSCPAVTPKRANVRFYPTAAAAQAGGF
RACRRCRPDAVPGSAEWNVRADVVGRAMRLIGDGVVDREGVPGLAGRLGYSARQVQRQLT
AELGAGPVALARAQRSHTARVLLQTTPLPVTEIAFAAGFASVRQFNDTIRQIYARTPSAL
RAEAGTGLGGGRREGLRAGIPLRLAHRGPYATAALFDLLAAEAVARIEEVAGTPGSRTYR
RTLRLPYGSGLASVDEASPGGPWLEARIQLTDLRDLTTAVQRVRRLFDLDADPYAVDEAL
AADRRLAPLVAARPGLRSPGAADPEEAAVRALVGRAAAGELVERYGKALDVPCGGLTHLF
PEPDVLAGSAEDPALRALATALADGRLRLDAGADRDEAEETLLALPGMDRPTAALIRIRA
LGDPDVDPYGTPGAERWRPWRSYAVRHLETAGAAEAAALG
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggacgatcggaccaggtacgaggcggtgagcagccgcgacgcacggttcgacggcgcg
ttcttcttcgccgtcgtgaccaccggcatctactgccggcccagctgccccgccgtcacc
cccaaacgcgccaacgtgcgcttctaccccaccgcggcggcggcccaggcgggcggtttc
cgggcttgccgccgctgccgcccggacgccgtgcccggctccgccgagtggaacgtccgc
gcggacgtcgtgggccgggccatgcgtctgatcggcgacggcgtcgtcgaccgcgagggc
gtccccgggctcgccgggcggctcggttacagcgcccggcaggtccagcgccagctcacc
gccgaactgggcgcgggccccgtcgcgctcgcccgcgcccagcgctcccacaccgcccgg
gtgctcctccagaccaccccgctgccggtcaccgagatcgccttcgccgccgggttcgcc
agtgtgcggcagttcaacgacaccatccggcagatctacgcccgcacccccagcgccctg
cgcgccgaagcggggacggggctcggcgggggccgccgcgaagggctgcgggccggcatc
ccgctgcggctcgcccaccggggcccgtacgccaccgccgccctgttcgacctgctggcc
gccgaagcggtcgcccggatcgaggaagtggccggcacacccggctcccgcacctaccgg
cgcaccctccggctgccgtacggctccgggctcgcctcggtcgacgaggcctcgccgggc
ggcccctggctggaggcccggatccagctcaccgacctgcgcgacctgaccaccgccgtc
cagcgggtgcgccgcctcttcgacctggacgccgacccgtacgccgtggacgaggcgctg
gccgccgaccgccgcctcgccccgctggtcgctgcccgccccgggctgcgctcgccgggc
gcggccgacccggaggaggccgcggtgcgggccctggtggggcgtgcggcggccggggag
ctggtcgagcggtacgggaaggcgctggacgtgccctgcggggggctcacccatctgttc
ccggagccggacgtgctcgccggttccgccgaggacccggcgctgcgggccctggccacc
gcgctcgccgacggccggctgcggctggacgccggggccgaccgggacgaggcggaggag
acgctgctggcgctgcccgggatggaccggcccaccgccgccctgatccggatacgggcg
ctcggcgaccccgacgtggacccgtacggcacaccgggcgcggagcggtggcggccctgg
cgctcgtacgccgtacgccatctggagacggcgggtgcggcggaggcggcagccctgggc
tga
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