Winmispira thermophila DSM 6578: Spith_0003
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Entry
Spith_0003 CDS
T02016
Name
(GenBank) DNA replication and repair protein recF
KO
K03629
DNA replication and repair protein RecF
Organism
stq
Winmispira thermophila DSM 6578
Pathway
stq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Spith_0003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stq03400
]
Spith_0003
DNA repair and recombination proteins [BR:
stq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Spith_0003
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
HTH_CLF_N
ABC_tran
CDC73_N
Motif
Other DBs
NCBI-ProteinID:
AEJ60290
UniProt:
G0GAY8
LinkDB
All DBs
Position
2711..3802
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AA seq
363 aa
AA seq
DB search
MFLTIGSEGFRNIVTGTIDVGAPVVVFVGENGQGKTNILELVYLLCYGVSFRTRQNTVLI
TRGRSSCRIHGEFRTEEGYILPILVEIGPTSKEIFLNEKKIANRKELFSISPCIVFAHDD
IQFVVGSPLLHRQFMNQILTLVDPLFLDSLRTYNRILTSRNEALKEAREDLLEVYDDQLA
DIAHQITVKRERMMDAFSSILRSTCEEFGFSGNVFDVSYRPSLRGDGKEELMRILRSERT
QDLMVGFTRRGPHRDRLVFTMNGHPVPDYASTGEIRLLSLLLRVAQTTYVRESTGKTPIL
LFDDVLLELDPLKRRRVVEMIPHGRQSFFTFLPEEPILQVLGGGRSLVYHVVEGRIFPDE
TSQ
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgttcctcaccatcggttcggaggggttccgcaatatcgtcacgggtacgatcgacgtg
ggagcccctgtggtcgtgtttgtcggcgagaacggtcagggaaagacgaatattctcgaa
ctcgtctaccttctctgctatggtgtttcgttccgtacacgacagaataccgttctgata
acgaggggacggagctcctgcaggatccatggagaattcagaaccgaggaaggatacata
ctccccatactcgtggagataggtcccacctccaaggagatattcctcaacgagaagaag
atagcgaacaggaaggaactgttttccatttctccatgtatcgtattcgcgcacgacgac
atccagttcgtggtagggtcgccgctcctccataggcagttcatgaaccagatcctcacc
ctggtggatcctctctttctcgactctctcaggacgtacaacaggatactcacctctcgg
aacgaggccctcaaggaagcacgggaggatcttttggaagtgtacgacgaccaacttgcc
gacatcgctcatcagatcacggtaaaacgcgagcgaatgatggatgccttttcttcgatc
cttcggagtacgtgcgaggagttcggattctcagggaacgtgttcgatgtctcgtaccgt
ccttcattgaggggagacggaaaagaggagttgatgcggatcctcaggagtgagcgcacg
caggatctgatggtggggttcacgcggcgcggtccccacagggacaggctcgtttttacc
atgaacggacatcccgtccccgactatgcttccacaggagagatacgtctgctctccctt
ttgctcagggtggcgcagaccacatatgtgagggagagtacgggcaagacccccatcctt
ctcttcgatgatgtgctcctcgagctcgatccgttgaagcgaagacgggtcgtagaaatg
attcctcatgggagacagagtttcttcacgttccttcctgaagagcccatcctccaggta
cttggaggaggaaggagtctggtgtatcatgtagtcgaaggacggatctttccggatgaa
acgagccagtga
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