Winmispira thermophila DSM 6578: Spith_0055
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Entry
Spith_0055 CDS
T02016
Name
(GenBank) metal dependent phosphohydrolase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
stq
Winmispira thermophila DSM 6578
Pathway
stq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Spith_0055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stq03019
]
Spith_0055
Enzymes [BR:
stq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Spith_0055
Messenger RNA biogenesis [BR:
stq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Spith_0055
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
Motif
Other DBs
NCBI-ProteinID:
AEJ60342
UniProt:
G0GBI3
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All DBs
Position
complement(56029..57111)
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AA seq
360 aa
AA seq
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MEPRDVLASLDRAGHRPRLAGYSALDRYFKVKGTPTHLWIQSTAELVDLARLFEGLEYPG
LEGVEAALTLEDTRIYFVTPHTPPPHPLLALTHDPSRDAFQAPDALYPLLRSPALALPTP
FTLSHALTCAVLLSRYPYTPPPTLPTLIPSPHPPTETQAATLSLILTGRTPWHGLALLSR
TEALPRLWPPLARLRDVHHVKDYHPEGSVWEHTLEALKHRKRPDLLLSLAILLHDIGKPD
AVPHGTNRFHLHANIGARIARTFLRDLDFPSSLQDDVAFLVRYHMLPGALPRIPPRSIAE
ILSSPLFPMLLELYRCDLSSTFRGPQPYYQACRAYRSFLKARRNPFRDPRLRRLIKLYVE
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
gtggaacctcgggatgtcctcgcctcactcgaccgggctggccaccgaccccgactcgcc
gggtattccgccctcgaccgctacttcaaggtgaagggaacccccacccacctgtggatc
cagagcaccgccgaactcgtcgacctcgcccgcctcttcgaaggactcgaataccccggc
ctggagggagtggaggcggccctcaccctggaagacacccgcatctacttcgtcaccccc
cacaccccccctccccaccccctcctcgccctcacccacgacccctcgcgcgacgccttc
caggctcccgacgccctctacccgctcctccgctcccccgccctcgccctccccaccccc
ttcaccctcagccacgccctcacctgcgccgtgctcctctcccgctacccctacacccca
ccccccaccctccccaccctcatcccgtccccccatccccccaccgaaacccaggccgca
accctctccctcatcctcaccggccggacaccctggcacggcctggccctcctctcccgc
accgaagccctgccccgactctggcccccgctcgcacgactccgcgacgtccatcacgtc
aaggactaccatccagaaggaagcgtgtgggagcacaccctcgaggccctcaagcaccgc
aaacgccccgatcttctcctctccctcgccatcctcctccacgacataggcaaaccagac
gccgtaccacacggcaccaaccgcttccacctccacgccaacatcggcgcccggatcgcc
cgcaccttcctccgggacctcgacttcccctcctccctccaggacgacgtggccttcctc
gtgcgctaccacatgctccccggcgccctcccccgcatccctccccggagcatcgccgag
atcctctcctcacccctcttccccatgctcctcgaactctaccggtgcgacctctcctcc
accttccgcggcccccaaccctactaccaggcctgcagggcctaccgctccttcctcaag
gcacgacgcaaccccttcagggacccccggctgagacgcctcatcaagctgtacgtggaa
tga
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