Spirochaeta thermophila DSM 6578: Spith_0293
Help
Entry
Spith_0293 CDS
T02016
Name
(GenBank) type III restriction protein res subunit
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
stq
Spirochaeta thermophila DSM 6578
Pathway
stq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
stq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Spith_0293
09124 Replication and repair
03420 Nucleotide excision repair
Spith_0293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stq03021
]
Spith_0293
03400 DNA repair and recombination proteins [BR:
stq03400
]
Spith_0293
Enzymes [BR:
stq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Spith_0293
Transcription machinery [BR:
stq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Spith_0293
DNA repair and recombination proteins [BR:
stq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Spith_0293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
Motif
Other DBs
NCBI-ProteinID:
AEJ60579
UniProt:
G0GDF3
LinkDB
All DBs
Position
complement(359912..361603)
Genome browser
AA seq
563 aa
AA seq
DB search
MLGPFIVQSDGTILLEVSHPEADEARNAITPFTELLTSPEYIHTYRITPISLWNAASAGL
TYDQIAERLSRYARYPVPPTLLDTIRHTLERAGTLTLLPTPSPHTLLLSIRPPASRRELL
SYRQLARLLEPSTPDLPPRDDALYVPLIHRGTIKQLLIDLGYPVTDLVPLQEGEPLPLML
RTTTRSSRPFALRPYQEAAVKAFTGDDGPGTGYGTIVMPCGAGKTVVGLALMAHYRTSTL
ILTPNVAAAHQWIDEILDKTTLTEDQIAEYTGESKDIKPVTVATYHILTWRPDHTQEYYP
HFDLFLARNWGLIIYDEVHLLPAPVFRITAELQAKRRCGLTATLVREDGKERHLFALVGP
KRYDIPWKDVEAQGWIAEALCYEIRIPLPEDLRLAYIAADQRKKHTIASTNPLKDRVVAA
LLERHADLPTLIIGQYLNQLERIARTLGLPLITGRTPNRERERLYREFKEGRITRLVVSR
VANFSIDLPDAAVAIQVSGTFGSRQEEAQRLGRILRPKHHHAYFYTIVTRDTLEEHFAAN
RQRFLTEQGYRYQMELWSEDELT
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgctcggcccattcatcgtacagagcgacggcaccatcctcctcgaagtctcgcatccc
gaggccgacgaggcccggaacgccatcacccccttcactgagctcctcacctccccagag
tacatccacacctaccgcatcacccccatctccctctggaacgccgcctctgcaggcctc
acctacgaccagatcgccgagcgcctctcccgctacgcccgctaccccgtgccccccacc
ctcctcgacactatccgccacaccctcgaacgcgccggcaccctcaccctcctccccacc
ccctcaccccacaccctcctcctcagcatccgcccccctgcgagccgccgggaactcctc
tcctaccgccagctcgcccgcctcctcgaaccctccacacccgacctcccaccccgagac
gacgccctctacgtgcccctcatccaccgcggcaccatcaagcagctcctcatcgacctc
ggctaccccgtcaccgacctcgtccccctccaggaaggcgaacccctccccctcatgctc
cgcaccaccacccgctccagccgccccttcgccctccgcccctaccaggaagccgcggtc
aaggccttcaccggcgacgacggacccggcaccggctacggcaccatcgtcatgccctgc
ggcgcaggcaagaccgtggtgggcctcgccctcatggcccactaccggacgagcaccctc
atcctcacccccaacgtcgccgccgcccaccagtggatcgacgagatcctcgacaagacc
accctcaccgaagaccagatcgccgagtacaccggcgagtccaaggacataaaacccgtc
accgtcgccacctaccacatcctcacctggcgacccgaccacacccaggagtactacccc
cacttcgacctcttcctcgcccgcaactggggcctcatcatctacgacgaagtccacctc
ctccccgccccggtcttccgcatcaccgcggaactccaggcgaaacgccgctgcggcctc
accgccacccttgtgcgcgaagacggcaaggaacgccacctcttcgccctcgtgggaccc
aagcgctacgacatcccctggaaagacgtggaggcccagggctggatcgccgaggccctc
tgctacgagatccgcatacccctccccgaggacctccgactcgcctacatcgccgcagac
cagcggaagaagcacaccatcgcgagcaccaaccccctcaaggaccgcgtcgtggccgcg
ctcctcgagcgacacgcagaccttcccaccctcatcataggccagtaccttaaccagctt
gaacgcatcgcccgcaccctcggccttcccctcatcaccggccgtacccccaacagggaa
cgggaacgcctctaccgcgagttcaaggaaggccgcatcacgcgcctcgtagtctcccgc
gtcgccaacttctccatcgacctccccgacgccgcggtcgccattcaggtctccggcacc
ttcggatcccgccaggaggaggcccagcgcctcggccgcatcctcagaccgaaacaccac
cacgcctacttctatacgattgtgacgcgtgatacactggaagaacacttcgccgccaac
cggcagcgattcctcaccgaacagggctaccgctaccagatggagctatggagcgaagac
gagctgacatag
DBGET
integrated database retrieval system
