Winmispira thermophila DSM 6578: Spith_0413
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Entry
Spith_0413 CDS
T02016
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03086
RNA polymerase primary sigma factor
Organism
stq
Winmispira thermophila DSM 6578
Pathway
stq02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
stq00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Spith_0413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stq03021
]
Spith_0413
Transcription machinery [BR:
stq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Spith_0413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
UCR_14kD
DUF2316
PQQ_syn_pqqF_N_2
Motif
Other DBs
NCBI-ProteinID:
AEJ60697
UniProt:
G0GEK9
LinkDB
All DBs
Position
500318..501196
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AA seq
292 aa
AA seq
DB search
MEAVKRKRKRRVQDSGDANVLSLYLKEINRIPLLSREEEDHYARLAAQGDQDAKEKLVTA
NLRFVVNVAKKYQNQGLPLADLISEGNIGLLNAIERFDPDKGYHFISYAVWWIRQAILKA
ISEKSRMIRLPLNRANELVQIEKARKLVQTESGEHNEIKKVAETLDYDEDHVANLLNLSK
EYVSLDTPVYEDRDSAMLGDYLKDEASRPPEDVVLEKTLQEEIQEVLATLTEKEAEIIQY
RFGLNGRHPMSLKEIGDMYNLTKERIRQIEKKALKKIQQSEKAKVLETYLAS
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagtcaagagaaagaggaaacgacgagtgcaggattcaggggatgcgaacgtg
ctctccctgtatctcaaggagatcaacaggatcccgctcctcagccgggaggaagaggac
cactacgcccgcctcgcggcacagggagatcaggatgccaaggaaaaactcgtcaccgcc
aacctcaggttcgtggtgaacgtggcgaagaagtaccagaatcaggggcttcctctcgcc
gatctcataagcgaagggaacataggcctcttgaacgccatagaacggttcgatcccgac
aaaggatatcacttcatctcgtacgcggtctggtggatcaggcaggccatcctcaaggcc
ataagcgagaagtccaggatgatccggctcccgctcaacagggcgaacgagctggtacag
atcgagaaggcgcggaagctcgtccagaccgagagcggagaacacaatgagataaagaag
gtcgcggagaccctggactacgacgaggatcacgtggcgaacctcctcaacctctcgaag
gaatacgtgtctctcgacacgccggtctacgaggatcgggattccgcgatgctgggcgac
tacctcaaggacgaggcctcccgaccgcctgaggacgtggtcctcgaaaagaccctccag
gaggaaatccaggaggtgctcgccacgctcacggagaaggaagccgagatcatccagtac
cggttcggcctcaacggcagacacccgatgtcgctcaaggagataggggacatgtacaat
ctcaccaaggagcgcatccgtcagatagagaagaaggcgctcaagaagatacagcagtcg
gagaaggcgaaggttctcgaaacgtatctcgcctcatag
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integrated database retrieval system
