Spirochaeta thermophila DSM 6578: Spith_0564
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Entry
Spith_0564 CDS
T02016
Name
(GenBank) DNA polymerase III domain-containing protein
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
stq
Spirochaeta thermophila DSM 6578
Pathway
stq03030
DNA replication
stq03430
Mismatch repair
stq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Spith_0564
03430 Mismatch repair
Spith_0564
03440 Homologous recombination
Spith_0564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stq03032
]
Spith_0564
03400 DNA repair and recombination proteins [BR:
stq03400
]
Spith_0564
Enzymes [BR:
stq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Spith_0564
DNA replication proteins [BR:
stq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Spith_0564
DNA repair and recombination proteins [BR:
stq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Spith_0564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA_16
AAA
Motif
Other DBs
NCBI-ProteinID:
AEJ60844
UniProt:
G0G9U4
LinkDB
All DBs
Position
651960..653132
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AA seq
390 aa
AA seq
DB search
MFENIIGHSQTVSQLSRELKEGSFPSSVLISGPPYAGKLTMALEISRVLSCEREAAWDCP
CDSCRRQRLLLEPLTLVVGPKRFLQEIRASWDTLMRAPGVATRFLFVRAVRKLTRRFDPV
LWEGEEGKVRQAFDLVAEITELLEGFYPSSEGGELGEGLVKAGERILGFCRKLEAFVPRD
GVPVAMVRRILSSVHLSSSRTPHVVIVEHADTLQEASRNALLKELEEPPAGTYFILLTRR
RTAIIPTILSRVRHYQLFERSTEEMRGVLARIFRLANPPEHLSAFFHQFSALEEEGLAAK
ARGFVRMLVGAASFDSSLLDVPREEWEAWYEVALDELSSFLPSSHAGEVEQVSRLLSRAC
FRVRDLNMNPQTVLEALFLERELAYSGGRP
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagaacatcatcggccacagccagacggtgtcacagctctcgagggaattgaag
gaagggagcttcccttcctcggtgctcatctcaggccctccatatgcggggaagctcacg
atggccctcgagatcagccgtgtgctctcgtgcgagagggaggcggcgtgggactgtccg
tgcgactcctgccggcgtcagcgccttctcctcgagcccctcaccctcgtcgtgggaccc
aagcgctttctgcaggagatacgcgcctcgtgggacaccctcatgcgggctccgggcgtg
gccacgcgcttcctcttcgtgagagcagtgcgcaagctcacccggaggttcgaccccgtg
ctctgggagggagaggaagggaaggtgcggcaggccttcgacctcgtggcggagatcacg
gagttgctcgaggggttctatccttcctccgagggaggagaactcggagagggattggtc
aaggcgggggaacgtatactcggattctgcaggaagctcgaggccttcgtcccccgggac
ggcgtcccggtggccatggtgcggcgcatcctctcgtccgtgcacctctcctcctcccgc
acgccgcacgtggtgatcgtcgaacacgccgacaccctccaggaggcctcccggaacgcc
ctcctcaaggaactcgaagagcccccggcagggacttacttcatcctcctcacccgcagg
cggacggccatcatccccaccatactctcccgcgtgcgacactatcagctcttcgaacgc
tcgaccgaggagatgcgcggtgtcctcgcacgcatcttccgccttgcaaaccctccagag
catctctctgcgtttttccatcagttctcggcactcgaagaggaggggcttgccgcgaag
gcgagaggattcgtccgcatgctggtgggggcggcctccttcgattcctcactcctcgat
gtgcccagggaggagtgggaggcgtggtacgaggtggcgctggatgaactctcctccttc
cttccttcctctcatgccggagaggtggaacaggtctcacgtctcctctcgcgggcgtgt
ttcagggtgagggatctcaacatgaatccccagacggtcctcgaggccctctttctcgag
cgggagctcgcatactcgggaggtcggccgtga
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