Winmispira thermophila DSM 6578: Spith_0807
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Entry
Spith_0807 CDS
T02016
Name
(GenBank) HhH-GPD family protein
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
stq
Winmispira thermophila DSM 6578
Pathway
stq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
stq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Spith_0807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stq03400
]
Spith_0807
Enzymes [BR:
stq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
Spith_0807
DNA repair and recombination proteins [BR:
stq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Spith_0807
Prokaryotic type
Spith_0807
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HVO_A0114
TrmB
MarR_2
MarR
HTH_Crp_2
DUF1823
HVO_A0261_N
DUF480
HTH_24
HTH_IclR
HTH_20
GntR
Motif
Other DBs
NCBI-ProteinID:
AEJ61082
UniProt:
G0GB58
LinkDB
All DBs
Position
929194..930012
Genome browser
AA seq
272 aa
AA seq
DB search
MGLGSAVVRGFQEEVLGFHRREGRDFPWRRTRDPYAIFVSEMMLQQTQTSRVVGKYGEFL
ARFPSWEVLAGARLGEVLEVWQGLGYNRRARGVWESARMVVEWWGGRLPKEPELLEVLPM
VGPYTARAVATFAYGKPCVFIETNIRTVFLDRFFPGREGVRDAEILPLVEETLYRDDVRT
WYYALMDVGAAIKARRGNAGRRSAHYRRQGRFEGSVRQVRGAVLRVLVKRGGCEVGELAE
RLGRGREEVEGVVGALEREGLVVREGGRVYVP
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgggactggggtcggcggtggtgagggggttccaggaggaggtgctggggttccaccgg
cgcgaggggcgggattttccgtggcggcgcacgcgtgatccgtacgcgatcttcgtctcg
gagatgatgctccagcagacgcagacgtcgcgggtggtggggaagtacggggagttcctg
gcgcggtttccctcgtgggaggtgctcgccggggcgaggctgggggaggtgctggaggtg
tggcaggggttgggatacaacaggcgggcgaggggggtgtgggagagcgcccggatggtg
gtggagtggtggggcgggcggctgccgaaggaaccggagctgctggaggtgcttcccatg
gtggggccgtacaccgcgcgggcagtggcgacgttcgcttacgggaagccgtgcgtgttc
atagagacgaatatccgcacggtgttcctcgatcggtttttcccggggagggagggggtg
cgggatgcggagattctcccattggtggaggagacgctctatcgggatgatgtgcgtacg
tggtactatgccctgatggatgtgggggcggcgatcaaggcgcggagggggaatgcaggg
cgcaggagcgcgcactaccggcgtcaggggaggttcgaggggtcggtgcggcaggttcga
ggggcggtgctgcgggtgctggtgaagcggggtgggtgtgaggtgggggagctggcggaa
cggctggggagggggagggaggaagtggagggggtggtaggggcgttggagcgggagggg
ttggtggtgagggaggggggaagggtgtatgtgccgtag
DBGET
integrated database retrieval system