Spirochaeta thermophila DSM 6578: Spith_0836
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Entry
Spith_0836 CDS
T02016
Name
(GenBank) transcriptional regulator, NifA, Fis Family
KO
K02584
Nif-specific regulatory protein
Organism
stq
Spirochaeta thermophila DSM 6578
Pathway
stq02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
stq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Spith_0836
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stq03000
]
Spith_0836
Transcription factors [BR:
stq03000
]
Prokaryotic type
Helix-turn-helix
Other families
Spith_0836
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
HTH_8
AAA_5
GAF_3
HTH_50
AAA_2
AAA
Mg_chelatase
AAA_3
TIP49
bpMoxR
ATPase
AAA_16
nSTAND3
GapR_DNA-bd
Motif
Other DBs
NCBI-ProteinID:
AEJ61111
UniProt:
G0GBN3
LinkDB
All DBs
Position
complement(966474..968048)
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AA seq
524 aa
AA seq
DB search
MERQLALLEKKVGELSLLFEVSQLLAQTIDVREVLQPVLRLIAEQLGMNRGTITLLNRNT
GEIVIEEAYGLSESQKLRGRYRIGEGVTGKVVQSGRPIVIPRISESREFLNRTGSRQKPQ
SGDLSFFCVPIKVGNEVVGTLSADRDYDPDLNLDDEARLLTILASLIAQAVKLKQELVEE
RERLMEENARLHEELKEHFRPANIIGTSKAMQDVFDMIARVSRSEATVLIRGESGTGKEL
IAQAIHYNSLRADKPFIRVNCAALPETLIESELFGHEKGAFTGALTRRKGRFELAHEGTI
FLDEIGDLSPQVQVKLLRVLQEKEFERVGGSETIRVNVRVLAATNRNLEELMAQGKFRED
LYYRLNVFPIHVPPLRERRSDILLLADHFIEKYAKQNNKHIHRISTPAINLLMSYHWPGN
VRELENCIERAVLLSTDGVIHSYHLPPTLQSAESTQTEFKGTLKEALENLERELIIDALK
TCRGNMSKAAEMLGITERIMGLRVRKYRINPKAFRPRTKVSTKM
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggaacggcaactcgctctcctagagaaaaaggtgggtgagctctcactccttttcgag
gtgagccagctcctcgcccagaccattgacgtacgggaagtcctccaaccggtactcaga
ctcatcgccgaacagttgggcatgaaccgggggaccatcaccctcctcaaccgtaacaca
ggggagatcgtgatcgaggaggcctacggactctccgaatcccagaagctgagggggcgc
taccggataggagagggggtgacgggaaaagtggtgcagagcggcagacccatcgtgata
ccacgaatctcggagagcagggagttcctgaaccggacgggatcacgccagaagccgcag
agcggggacctctccttcttctgcgttcccataaaggtgggaaacgaagtggtggggaca
ttgagtgcggacagggattacgatcccgacctcaacctcgacgacgaggcacgcctcctc
accatcctcgcctccctcatcgcccaggcggtgaagctcaaacaggagctcgtggaggaa
cgggaacgcctcatggaggagaacgcgcggctgcacgaggaactcaaggaacacttccgt
cctgcgaacatcatcggcacatcgaaggccatgcaggacgtcttcgacatgatcgcgcgg
gtctcgaggagtgaagcgaccgtgctcatccgaggggaaagcggcacgggcaaggaactc
atcgcccaggccattcactacaacagcctgcgggcggacaagccattcatacgggtcaac
tgcgcggccctgcccgagaccctcatagagagcgagctcttcggacacgagaaaggggcc
ttcaccggggccctcacgagaaggaagggacggttcgaactcgcccatgaagggaccatc
ttcctggacgagataggagacctctccccccaggtacaggtgaaactcctccgggtgctc
caggagaaggagttcgagcgggtggggggaagcgagacaatccgggtgaacgtacgcgtg
ctcgccgccaccaacaggaacctggaagagctcatggcccaggggaagttcagggaagac
ctctactaccggctcaacgtcttcccgatccacgttcccccgctcagggagagacggagc
gacatcctcctcctcgccgatcatttcatagagaaatacgcgaagcagaacaacaagcat
atacatcgcatctcgacgccggccatcaatctgctcatgagttaccactggcccgggaac
gtcagggaactcgagaactgcatagaacgtgccgtccttctcagcaccgacggagtgatc
cacagctaccacctcccccccaccctccagagcgccgaatccacgcagaccgagttcaag
gggaccctcaaggaggccttggagaatctggaacgtgaactcatcatcgacgccctcaag
acgtgcagagggaacatgtcgaaagccgccgagatgctggggatcaccgagcgcatcatg
ggactcagggtgaggaagtacaggataaaccccaaggccttcaggccacgaacgaaggtt
tccacaaaaatgtag
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