Winmispira thermophila DSM 6578: Spith_1116
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Entry
Spith_1116 CDS
T02016
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
stq
Winmispira thermophila DSM 6578
Pathway
stq00550
Peptidoglycan biosynthesis
stq01100
Metabolic pathways
stq01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
stq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Spith_1116
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Spith_1116
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
stq01011
]
Spith_1116
Enzymes [BR:
stq01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Spith_1116
Peptidoglycan biosynthesis and degradation proteins [BR:
stq01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Spith_1116
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
AEJ61388
UniProt:
G0GE35
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All DBs
Position
1244666..1246525
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AA seq
619 aa
AA seq
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MNVKEYGKTSSNQRISILIALSVVIVFLYIGRLFSVQVVENELFSAQSQKTIQRAVLIPA
RRGDVFARDYRSILATSRDSFTLLFFRSEVGKEQLPPLVDRLGGHLGVSARSLLDKIESS
ASDPVVLAQGVGYEQIVGIAEHLSEFPGIGWQREPSRYYPYGDLFAHVVGYIGEITQEEL
TALYNKGYTQGTLIGKSGVEKVYDELLRGKTGLKHRIVDASGQILDEQVVFFPENGKTLV
LTLDPAIQTLIKKALGPRNGAIVVLKPSTGEILGLYSYPSYDSNLLYDPKEGRAYFTRLS
LDKSFPFINRAIQSSYAPASTFKIVMTAAVLMEKVFPPDRTIVCRGEYRYGDRVFKCWKE
AGHGPLALEDALAQSCDVYFYTVGAEYLGVDRIAAYAKEFGLGEPTGIDLPGEVRGIVPT
PRWKMETYNYPWVGGDTVNMSIGQGFLSVTPLQLADVVASVVNGGFIMRPHVLKEVRDPT
TGEVLENISPSLLRTSNITEDVFSSVRAAMRGVVTHGTALPVITTPIVEVAGKTGTGEVG
LENRYTSWFVGYAPYDALDPEEVVVVSVLVEATNDWEWWAPKAANIVFHGIFSGLSYEDT
VRELRQGPARWYLPALEDR
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgaaggaatacggcaaaacctcctcgaatcagaggatttccattctcatcgcc
ctcagcgtcgtgattgtatttctctatataggccgtctcttttccgtacaggtggtggag
aatgagctgttctccgcccagtcgcagaagacgattcagcgggcggtgctcatcccggcc
cggcggggagacgtctttgcgagggactataggagcatcctggccacgagcagagacagt
ttcaccctgctctttttcagatccgaagtgggaaaagaacaactcccgcctcttgtggat
cgactgggcgggcaccttggggtttcagcacgtagccttttggacaagattgaatcctcg
gcctcggatcccgtggtgctcgctcagggcgtgggatacgagcagatcgtagggatcgct
gaacatttgtcagagttcccggggatcggatggcagcgtgaaccatcccggtattatccc
tatggggatctcttcgcccatgtggtcggatacatcggggagatcactcaggaggagctc
accgccctctacaacaagggctatacccaggggaccctcataggaaagtcaggggtggag
aaggtgtacgacgaactcctccgaggaaagaccggattgaaacatagaatagtcgatgca
tcgggacagatcctcgatgagcaggtggtgttctttcctgagaacggaaagacactcgtg
ctcaccctcgaccccgcgatacagacgttgataaagaaggctcttggaccaaggaacggg
gccatcgtggtattgaagccttccacaggggagatcctcggtctttattcgtatccctct
tatgactccaatcttctctatgatcccaaggaggggagggcctacttcactcgattgagt
ctcgacaagtcgtttcccttcatcaacagggccatccagtcgagttatgccccggcttcc
accttcaagatcgtcatgactgcagctgttctcatggaaaaggtctttcctccggatagg
acgatcgtctgcaggggtgagtaccgctatggagatagggttttcaagtgctggaaggaa
gcagggcatggtcccctagcccttgaagacgcgctcgctcaatcgtgtgatgtatacttc
tacacggtcggggcggaatacctgggggtggacaggatagcggcctatgcgaaggagttc
ggactgggggagcccacggggatcgaccttccaggagaggtgagggggatcgtccccaca
cccagatggaagatggagacctacaactatccctgggtgggaggagatacggtcaacatg
tcgataggtcagggcttcctcagcgtcaccccgcttcagctcgcggacgtagtggcgtcg
gtggtgaacggaggcttcatcatgaggcctcatgtattgaaggaggtccgggatcccacg
acgggagaggtcctggagaatatatccccctccctcttgcgaacgtccaatatcacggaa
gatgtgttcagctctgttcgtgcagcaatgcggggagtcgttacccatggaaccgccctc
cctgtcatcacgacaccgattgtggaagtggcggggaagaccggaacgggagaggtgggc
ctggagaaccgatacacctcctggttcgtaggttatgctccttacgatgccttggatccc
gaggaagtggtcgtggtgtcggtgctggtggaggccacgaatgactgggaatggtgggcg
ccgaaggcggcgaacatcgtgtttcatggtatcttctcagggttgtcgtatgaagatacc
gtcagagaactgaggcaaggtcctgcccgatggtatcttcccgcgttggaggatcgatga
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