Winmispira thermophila DSM 6578: Spith_1142
Help
Entry
Spith_1142 CDS
T02016
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
stq
Winmispira thermophila DSM 6578
Pathway
stq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Spith_1142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stq03019
]
Spith_1142
03016 Transfer RNA biogenesis [BR:
stq03016
]
Spith_1142
Enzymes [BR:
stq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Spith_1142
Messenger RNA biogenesis [BR:
stq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Spith_1142
Transfer RNA biogenesis [BR:
stq03016
]
Prokaryotic type
tRNA degradation factors
Spith_1142
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_KhpA-B
PDCD7
KH_2
KH-I_KHDC4-BBP
DUF4891
sCache_like
KH_PNO1_2nd
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
AEJ61414
UniProt:
G0GE61
LinkDB
All DBs
Position
complement(1277450..1279579)
Genome browser
AA seq
709 aa
AA seq
DB search
MEHSVTIDVGGRELVLTTGKMARQANGAVFAQYGGTCVLATACCGSDVKEDLDFIPLSVD
YNEKYYAAGKIPGGFFKREGRPREKEILVSRLIDRPMRPLFSKAFKREIQIIPTTVSADQ
INTPDVVAIVAASAAVTVSDIPFDGPVGAVRVGLVDGTFVINPTLEQLEASALDIVVAGT
LEGITMVEGGAKEVSEDTLVEAIEIARGAIVSLCKAQLELSERAGKKKLPLQEEESFPLK
DEVIAYARPRLEEACFVKGKLERAKAIKKTREEVRTYFGERIPDEQERAFNAVIEELERE
IVRSSILERGIRTDGRGPEDIRPITCEVGVLPRTHGSALFTRGETQALAITTLGTVFDEQ
IMDDLEGDKRENFMLHYNFPPFSVGEVGRLYTGRREIGHGHLAHRALEAVLPSKDDFPYT
LRVVSEILESNGSSSMATVCGSTLSLLNAGVPIKKPVAGIAMGLVTDGERTVILSDILGE
EDHFGDMDFKVAGTEEGITAFQMDIKIKNIDPATMRKALEQARRGRLHILGIMNQAISEP
RPELSQYAPRIIKFAVDPEKIGLIIGSAGKTIRQISETFDVTINIDDDGSIVIYSKQKEK
AEQAKAYIDKMLEEPEVGKVYTGKVKRIVDFGAFIEFLPGREGLCHISQMSVDRIGSPHD
VVKLNQEVPVRILEIDRLGRVNLTMLIDESMAKEKAQSYSRRPPRTRRR
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggaacattcagtgacaatagacgtaggaggacgggaactcgttctcacgacaggaaag
atggcccgtcaagcaaatggagcggtcttcgcccagtacggaggcacatgcgtcctcgca
accgcctgttgcgggagcgatgtgaaggaagacctcgatttcattcccctctctgtggat
tacaacgaaaaatactacgctgcaggaaagatccccggaggatttttcaagcgggaaggg
cgtccacgggagaaggagatcctcgtttcccgtctcatcgacaggccgatgagacctctc
ttctcgaaggcattcaagagggagatccagatcatccccaccacggtatccgctgatcag
atcaacacgcccgatgtggtggcgatcgtggcggcctctgctgccgtcaccgtctccgac
atccccttcgacgggccggtgggggcggtgagagtggggctcgtagacggcacgttcgtc
atcaatcccaccctggagcagctggaggcctcggctctcgatatcgtagtggcgggaacc
ctggaaggcatcaccatggtggaaggcggggcgaaagaggtctccgaggacaccttggtg
gaggcgatcgaaatcgcccgtggcgccatcgtttcgctctgtaaggcgcagctggagctt
agcgaacgcgcaggcaagaaaaagctccccctccaggaagaggagagtttcccgctcaaa
gatgaagtgatagcatacgcccgtccccgactcgaagaggcatgcttcgtcaaggggaaa
ctcgaacgggcaaaggccataaagaagacgcgggaagaggtcagaacctacttcggagaa
cgaattcccgatgagcaggaacgtgccttcaatgcggtgatcgaagagctcgaacgggag
atcgtacgttcctcgattctggaacggggaatccgaacggacgggagggggccggaggac
atacgccccatcacctgcgaggtcggcgtccttcctcggacgcatggatccgctctcttc
acgagaggcgaaacccaggccctcgcgatcaccacactcgggaccgtgttcgacgagcag
ataatggacgacctcgaaggcgacaaacgggaaaacttcatgctccattacaacttcccc
cccttctcggtaggtgaggtgggaaggctctatacgggccggcgtgaaataggtcacggt
catcttgcacatcgggcgttggaggctgtgctcccctcgaaagacgacttcccctatact
ctccgcgtggtctcggagatcctcgaatcgaacggctcttcctcgatggcgacagtctgt
ggaagcaccctctccctgctcaatgcaggggtccccatcaagaaacccgtggccgggatc
gcgatgggattggtgacggacggggagcgcacggtgatcctctccgacatcctgggcgag
gaggatcacttcggtgatatggacttcaaggtggccggtacggaagagggtatcacggcc
ttccagatggatataaagatcaagaacatcgatccggccacgatgaggaaggccctggag
caagcccgtaggggaaggctccacatactcgggatcatgaatcaggccatctccgaaccg
cgcccggaactctcccagtacgctcctcgtatcatcaaattcgccgtcgatcccgagaaa
ataggtctcatcatcggatccgccggtaagacgatcaggcagatctcggagactttcgac
gtaaccatcaacatcgacgacgatgggagtatcgtcatctacagcaaacagaaggagaag
gccgaacaggcgaaggcctacatcgacaagatgcttgaggaaccagaggtagggaaagtc
tacactggtaaggtgaaacggatcgtggatttcggagcattcatagaattcctcccgggg
agggaaggcctctgccatatctcccagatgtcggtcgatcgcattggatcgccccacgat
gtcgtgaagctgaatcaggaggttcctgtgaggatcctcgaaatagatcggttggggagg
gtgaatctcaccatgctcatagacgagagcatggcgaaagagaaggcgcagagctactct
cggagaccgccccggacgcgtcgcaggtag
DBGET
integrated database retrieval system
