Winmispira thermophila DSM 6578: Spith_1145
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Entry
Spith_1145 CDS
T02016
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
stq
Winmispira thermophila DSM 6578
Brite
KEGG Orthology (KO) [BR:
stq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stq03016
]
Spith_1145
Enzymes [BR:
stq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Spith_1145
Transfer RNA biogenesis [BR:
stq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Spith_1145
Prokaryotic type
Spith_1145
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AEJ61417
UniProt:
G0GE64
LinkDB
All DBs
Position
complement(1280636..1281502)
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AA seq
288 aa
AA seq
DB search
MNGILLCHKPPGIRSFEVVERVRRRLGGVRTGHTGTLDRFAEGLLILLTGRCTRLTPIFH
SLSKEYEAVIEFGKETDTLDPEGRIIQVGPVPEEKALKETLGRFLGTYEQIPPAYSALRV
GGRRAHDLARRGEEPDLAPRRVEIYALSLLEWRPPYATVRVSCSGGTYIRALARDIGSRL
GTCAYVSELKRTAIGPISSDGAVHPDEVTGEDVLTPEAFLNAYPETAPPLTVKPSHERGI
PHGIPLSDHTWDTPPEAQGYYTVVSRDGRVLAFIEKAEERYRYICVLP
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaatactcctctgtcataaacctcccggcatacgctccttcgaagtggtggaa
cgagtgcgcaggcgtctcgggggcgttcgtaccggtcataccggcaccctcgaccgtttc
gccgaagggcttctcatcctgctcacgggtcgatgcacccgactcacaccgatattccac
tcgctatccaaggaatacgaagccgtcatcgaattcggcaaagagaccgatactctcgac
cccgaaggcaggatcattcaggtgggccccgtccccgaagaaaaggcgctcaaggagacc
ctcggaagattcctcgggacatacgaacagattcctcccgcctattcggccctgcgggtg
ggagggcgtcgggcacacgacctggcgagaaggggggaggaaccggatctggcccccaga
cgtgtggagatatacgcactctccctcctcgaatggaggcctccctatgcgaccgtacgg
gtctcctgctccggaggaacctacatacgggctctcgcccgagacatcggatccaggctc
gggacctgtgcctatgtgagcgaactgaaacgcactgcgatcggtccgatttcatccgac
ggcgcggttcatcccgacgaggttaccggcgaggatgtgctcaccccggaagcgttcctg
aacgcgtatcccgaaacagccccccctttgacagtcaaaccttctcatgagaggggcata
ccccatggaatccctctttcggaccacacgtgggacacccctccagaggcacaagggtac
tacaccgtcgtgagtcgagacggcagggttctggccttcatcgaaaaggcggaagagagg
tatcgctacatatgtgtgcttccgtag
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