Winmispira thermophila DSM 6578: Spith_1235
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Entry
Spith_1235 CDS
T02016
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
stq
Winmispira thermophila DSM 6578
Pathway
stq03030
DNA replication
stq03430
Mismatch repair
stq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Spith_1235
03430 Mismatch repair
Spith_1235
03440 Homologous recombination
Spith_1235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stq03032
]
Spith_1235
03400 DNA repair and recombination proteins [BR:
stq03400
]
Spith_1235
Enzymes [BR:
stq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Spith_1235
DNA replication proteins [BR:
stq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Spith_1235
DNA repair and recombination proteins [BR:
stq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Spith_1235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AEJ61501
UniProt:
G0GEU5
LinkDB
All DBs
Position
complement(1380004..1380600)
Genome browser
AA seq
198 aa
AA seq
DB search
MSTSTDPGRDPVSIDWRKEVVVAFDLETTGLDPVRHSVVEIACVKFQGGEPRAFFSLLVK
PPHPIPAEVTKIHGIGDQDVEEAPPLPSVLPMLESFVGTHLLVAHNAPFDLSFLRIEYAR
CGRPYPGFRAIDTRLLARSVLPHLGRYSLASLTRALDIPLQQHHRALSDAWACGDLFYAL
AERSSGEGSLPLEGILVG
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacctcgactgatcctggaagagatcccgtatcgatcgattggcgcaaggaggtg
gtggtggccttcgatctcgagaccaccgggctcgatcctgtgcgccattcggtggtggag
atcgcgtgcgtgaagttccagggcggagaaccccgtgccttcttctccctgctcgtgaag
cctccccatcccattcctgccgaggtgacgaagatccacgggatcggcgatcaggatgtg
gaggaagcacctcccctcccgtccgtgcttcccatgctcgagtccttcgtggggacgcac
ctcctggtggcccacaacgctcccttcgacctctctttcctgagaatagaatacgcccgt
tgtggacgtccctatcctgggttccgcgccatcgacacccggctccttgccaggagcgtc
ctccctcatctgggcaggtacagcctcgcatccctcacccgagccctggatatccccctg
cagcagcatcacagggcattgagtgacgcatgggcctgcggggatctcttctacgccctg
gcagagcgctcgtccggagaggggtccctcccgctcgaagggatactggtcggttag
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integrated database retrieval system
