Spirochaeta thermophila DSM 6578: Spith_1671
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Entry
Spith_1671 CDS
T02016
Name
(GenBank) Ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
stq
Spirochaeta thermophila DSM 6578
Brite
KEGG Orthology (KO) [BR:
stq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stq03016
]
Spith_1671
Enzymes [BR:
stq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Spith_1671
Transfer RNA biogenesis [BR:
stq03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Spith_1671
Prokaryotic type
Spith_1671
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_4
PDEase_II
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
AEJ61931
UniProt:
G0GBC2
LinkDB
All DBs
Position
complement(1879171..1880106)
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AA seq
311 aa
AA seq
DB search
MNMEVFVLGTGGMMPLPYRYLTSVLVRREGELFLFDCGEGTQVSLRSLNLRWKKISAIFI
SHTHADHVTGLPGILMLSSQVDRSEPLYIYGPPKIREYVEMSRQVLDMYINYEIVVEEVP
WGESVVCYRGEGFSVRTIPLRHTKPCVGYVLEEDPRPGVFHPERARELGVPMGPLWSRLQ
RGEVVKNVRGEEVRPEMVLGPPRAGRKVAFVTDTLYLPHIKDYVKGADLFICEGMFSHEL
AETAAEKRHLTAREAGRIAREAEGVGKLGLIHYSPRYTNRDLQVLLEEAKEEFPEAFLCR
DRQTIPIPYRD
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaacatggaagtgtttgtcctcggtaccggcgggatgatgccgctcccgtacagatat
cttacgtccgtcctcgtccggagggagggggagctcttcctcttcgactgcggggaggga
acccaggtctcgctccgttccctgaacctcaggtggaagaagatctcggcgatcttcatc
tcacatacgcacgccgatcatgtgaccgggctgccggggatcctcatgctctcctctcag
gtggatcggtccgagccgctctacatctacgggcctcccaagatcagggagtacgtggag
atgagcaggcaggtcctcgacatgtacataaactacgagatcgtggtcgaggaggtgccg
tggggggagtcggtggtgtgctacaggggggaggggttttcggtgcggacgattccgctt
cggcataccaagccctgtgtgggctacgtgttggaggaggatccccggcccggggtcttt
catccggagcgggcgcgggagctcggggtgccgatggggccgctgtggtcgcgccttcag
cggggcgaggtggtgaagaacgtgcggggagaggaggtgcggcctgagatggtgctgggt
cctcctcgtgcggggaggaaggtggcgtttgtgacggatacgctctacctgccccacatc
aaggactacgtgaagggggcggatctctttatctgcgaggggatgttctcccatgagctc
gccgagacggcggctgaaaagcggcacctcacggcgagggaggcggggaggatcgcgcgg
gaagcggagggggtgggaaagctggggctcatacactacagcccgcgctacacgaatcgg
gatctccaggtgctcctcgaggaggcgaaggaggagttcccggaggcctttctctgccgg
gacaggcagacgatccccataccgtacagggactag
DBGET
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