Winmispira thermophila DSM 6578: Spith_1698
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Entry
Spith_1698 CDS
T02016
Name
(GenBank) DNA repair protein recO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
stq
Winmispira thermophila DSM 6578
Pathway
stq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Spith_1698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stq03400
]
Spith_1698
DNA repair and recombination proteins [BR:
stq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Spith_1698
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Spith_1698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
AEJ61958
UniProt:
G0GBU7
LinkDB
All DBs
Position
complement(1910423..1911193)
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AA seq
256 aa
AA seq
DB search
MRRNKRTEGVVVRSRPVGDQDRAVVILSREGLLEATAYGAQRPSSRLGAAAQVGSRAVFY
LYVNPVKGHVKVSDVDRVEVLDAGGLEGLAVFQLWADLVVATHGAGHEAEVYRLLLEGRD
ALRRAGGVEEVERVLLGWLLRFLGLLGVAPEWDRCARCGRGLGEEGAWWGSVEEGLLCRG
CAGGREGAWWLSGAMRGVCAGFAEGRLGLGVRVRMEEGVRRGLVRVVLERGEEAVGRRLA
SAGLVREVLGVSGGGG
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaggaacaagcgaacagagggggtggtggtccgctcccggccggtgggggatcag
gacagggcggtggtgatcctctctcgcgaggggctccttgaggcgacggcctacggcgcc
cagcggccttcttccaggttgggggcggctgcgcaggtgggctcccgggcggtcttctac
ctctatgtcaatccggtgaagggtcatgtgaaggtctcggatgtggatcgggtggaggtg
ctggacgcaggcgggctcgaggggctcgcggtgttccagctgtgggccgacttggtggtg
gcgacgcatggggcggggcacgaggccgaggtgtatcggctgctcctggaggggagggat
gcgctcaggcgggcgggtggggtggaggaggtggagcgggtgctcctggggtggctcctg
aggttcctggggctcctgggggtggcgccggagtgggatcggtgcgcgcggtgcgggagg
gggttgggtgaggagggggcgtggtgggggagtgtggaggaggggctcctgtgcaggggg
tgtgcggggggaagggagggggcgtggtggttgagcggggcgatgcggggggtgtgtgcg
gggttcgcggaggggaggctggggttgggggtgcgggtgcggatggaggagggggtgagg
aggggtctggtgagggtggtgctggagcggggggaggaggcggtggggagacgactggcg
agtgcgggtctggtgcgggaggtgttgggggtcagcgggggaggtggctga
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