Winmispira thermophila DSM 6578: Spith_1874
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Entry
Spith_1874 CDS
T02016
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
stq
Winmispira thermophila DSM 6578
Pathway
stq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
stq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Spith_1874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stq03400
]
Spith_1874
Enzymes [BR:
stq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Spith_1874
DNA repair and recombination proteins [BR:
stq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Spith_1874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AEJ62132
UniProt:
G0GD57
LinkDB
All DBs
Position
complement(2101643..2102404)
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AA seq
253 aa
AA seq
DB search
MSEQDLYKELWELSFLVEDLVHGGWERPHPEPPTVPGEAPPLVAGSGERSEGKPTGGDDP
ARTLGALHEQVRACNRCDLARTRRQAVPGTGRVGLPVMVVGEAPGADEDVKGEPFVGRAG
QYLDKWLAAIGLQRGRDVFITNVVKCRPPGNRDPRPDEISACLPFLEAQIALVRPRAILT
VGRFAASTLLGTQEGISRLRGRVYRYRDIPLVPTYHPSAVLRDPSLRRPVWEDLKLLSSV
LRGEGAGVHDASR
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagcaggacctctacaaggagttgtgggagctttcgttcctggtggaagacctc
gtccatgggggatgggagcgcccacaccccgaaccacccaccgtcccgggggaagcgcct
cccctcgtggcgggatcaggagagaggagtgaggggaaacccaccggcggggacgatccg
gcacgtacgctcggggccctccacgagcaggtgcgcgcctgtaaccggtgtgacctcgcc
cggacccggcggcaggccgtgccggggacagggagggtgggcctcccggtgatggtggtg
ggagaggcccccggtgcggacgaagacgtgaagggcgagccgttcgtggggagggccggg
cagtacctggacaagtggctcgcggccatagggctgcagcgaggccgggatgtcttcatc
acgaatgtggtgaagtgcaggccgccggggaaccgcgatccccgtcccgacgagatttcg
gcctgtctccccttcctcgaagcacagatcgcgctcgtgagaccgcgggccatcctcacg
gtggggaggttcgccgcctccactctgctcggtacacaggagggcatctctcgcctccgg
gggagggtctatcggtaccgggacattcccctggtgcccacctaccatccgagcgcggtc
ctcagggatccgtcgctgaggaggcctgtctgggaggacctcaagctcctctcttccgtc
ctgcgcggggagggggcgggcgtgcacgatgcctcgaggtga
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