Spirochaeta thermophila DSM 6578: Spith_1935
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Entry
Spith_1935 CDS
T02016
Name
(GenBank) glycoside hydrolase family 2 sugar binding protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
stq
Spirochaeta thermophila DSM 6578
Pathway
stq00052
Galactose metabolism
stq00511
Other glycan degradation
stq00600
Sphingolipid metabolism
stq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
stq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
Spith_1935
09103 Lipid metabolism
00600 Sphingolipid metabolism
Spith_1935
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
Spith_1935
Enzymes [BR:
stq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
Spith_1935
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro2_C5
Glyco_hydro_2_C
DUF4982
Glyco_hydro_2_N
Glyco_hydro_2
CBM_6
Glyco_hydro_2_N2
Invasin_D3
Big_1
Motif
Other DBs
NCBI-ProteinID:
AEJ62193
UniProt:
G0GDR3
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All DBs
Position
2163356..2166781
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AA seq
1141 aa
AA seq
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MNRMQLFNNDWEFAVTPPGTEEWHGLSFRPVEIPHDWLIGDSTRLYEDSTGWYRKILVWE
GRATHASLYFEGVYMDSTLYVNGREAGNWKYGYSSFEHEITPFLREGENELVVKVVHRAP
NSRWYSGAGIYRNVWLILRGASYIPTHGVYVTVRKGEETWSVEIETELHLTQEAVLEHTL
WYRRRPVSSCRKMVSRDTSLDASSLEVRDPLLWSPEAPHLYTLLTLLYDGEGTIIEEIPT
PVGFRHLAFHPHRGLLVNGMPTKLHGTCEHHDLGALGAVFNRAAMRHRLSLLKSMGVNAL
RTAHNMPAPDLMHLADEMGFFVVSEAFDMWERPKTRYDYARFFPEWYERDVASWVRRDRN
HPSLLMWSIGNEIYDTHVSERGVELTRLLAAEVRKHDPKGNAPVTMGSNYMPWEGAQRCA
DILKVIGYNYGEAYYHEHHEAHPDWVIYGSETASVVQSRGVYHFPFDCTILAEEDEQCSA
LGNSSTSWGAPSHEACIAADRDAPFSLGHFIWSGFDYLGEPTPYHTKNSYFGQIDTAGFP
KDSFYIYKAAWTDYRRDPFVHIFPYWDWNPGQLIDVRVCSNAPRIALYLNGRLIGIKDID
HQHGTEQTGWWKIPYEPGELVALAYDDEGRCVARAVRRSFGDPARLRLTPSREFIEADGR
DVVFVTIEILDAEGNPVENASNRVRVEVRGAGRLLGLDNGDSTDYDSYHATSRRLFNGKL
MALIGATRETGPVEMVVHSKDLPPARLILTAVPSERTDLDCISVIHRAEEKPCRTGREDE
IPVRKIELTVIEGTRMLTPDSPSVRIEARLLPENTSYREVEWKAVTPNGIETPLALVRPE
GLEAVVTARGDGSFFVRCTSRNGTDTVRLISQLECTAEGFGRLHKDPYSFISAGLYDDSN
GKVTPGNEKGIATARDGITIVGFTDLDFGPDGSDTITIPIFALSADPYRLQIWRGHPEAP
ESELLADVIYRKDPVWNVYQEARYRLRRRLRGVQSLYFLTEAKMHMKGFVFERQVRAYST
IHAHEYDVIYGDDCEITSQGVERIGNNVTLTFENLDFGDEPPKNLTIYGRSRTDNNSIQI
RFEQEDRRIVHLIEFPYSVDSVERTYPLPPLPAGRMDVSFVFLPGSSFDLGWFRFGRDPG
P
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgaaccggatgcaacttttcaacaacgactgggagttcgccgtaacaccgcccggcacc
gaggagtggcacgggctttccttccgcccggtggagatcccccacgactggctcatcggt
gacagtacgcgtctctacgaggactcgacaggctggtacaggaagatcctcgtctgggag
gggcgagcgacgcacgcgtccctctacttcgagggagtgtacatggacagcaccctctac
gtgaacgggagggaggccggcaactggaaatacgggtactcctcgttcgagcacgagatc
accccctttctcagggagggtgagaacgagctcgtggtgaaggtggtgcaccgggccccc
aacagcagatggtactcgggagcgggaatctatcggaacgtgtggctcatcctccgggga
gcgagctacatccccacccatggggtgtacgtgacagtgcgaaaaggcgaagagacgtgg
agcgtggagatcgagaccgagctccacctcacgcaggaggcggtcctcgagcacaccctg
tggtaccggaggagaccggtctcctcctgccggaagatggtctcaagggacacctccctc
gacgcatcatctctcgaggtacgagaccccctcctgtggagccccgaggcgcctcacctc
tacacccttctcaccctcctctacgacggcgaaggaaccatcatcgaggaaattcccacc
cccgtggggttccgccacctcgccttccatccccatcgcggcctgctggtgaacgggatg
cccaccaagctccatggcacctgcgaacaccacgacctcggcgccctgggcgcggtcttc
aatcgggcggcgatgcgccaccggctctccctcctcaagtcgatgggggtgaacgccctc
cggacggcccacaacatgccggcacccgatctcatgcacctcgccgacgagatgggattc
ttcgtggtgtccgaggccttcgacatgtgggaacggcccaagacgcgatacgactacgca
cgattcttccccgagtggtacgaaagggacgtggcgagctgggtgcggagggacaggaac
catccctccctcctcatgtggagcatcggcaacgaaatctacgacacccacgtgagcgag
cggggagtggaactcacccgcctcctcgccgccgaggtgcggaagcacgaccccaagggg
aacgcccccgtcaccatggggtcgaactacatgccctgggagggagcgcagcgatgcgcc
gatatcctcaaggtgataggttacaactacggtgaggcctactaccacgaacaccacgag
gcccaccccgattgggtcatctacgggagcgagaccgcctcggtggtccagagccggggg
gtataccacttccccttcgactgcacgatcctggcggaggaagacgagcagtgctcggca
ctgggcaacagctctacgagctggggtgctccttcgcatgaggcgtgtatcgccgccgac
agggacgcccccttctccctgggacacttcatctggagcgggttcgactaccttggggaa
cccacgccctatcataccaagaactcgtatttcggtcagatcgacactgcggggttcccc
aaggattccttctatatatacaaagcggcatggaccgactaccgacgtgatcccttcgtc
cacatcttcccctactgggactggaaccccggacaactcatcgacgtgagagtgtgctcc
aacgccccccggatcgccctctacctcaacggccgcctcatcgggatcaaagacatagac
catcagcacggcaccgagcagacagggtggtggaagatcccctacgaacccggggagctc
gtggccctcgcctacgacgacgagggcaggtgcgtggcacgagcggtccgcaggtccttc
ggggatcccgcccgactcaggctcaccccctcacgggagtttatcgaagccgacggccgg
gacgtcgtcttcgtgaccatagagatcctcgatgcggaggggaaccccgtggagaatgcc
tccaaccgggtgcgggtggaggttcggggggcgggacgccttctcgggctcgacaacggc
gacagcaccgactacgattcgtaccatgccacgagcaggcgtctcttcaacgggaaactc
atggccctcatcggcgccaccagggagacgggccccgtcgagatggtcgtccactccaag
gacctcccccccgcgcgtctcatcctcaccgccgtcccctcggagaggaccgacctcgac
tgcatctcggtgatccaccgggcggaggagaaaccctgccgcaccggccgggaagacgag
atcccggtgaggaagatcgaactcacggtgatcgaggggacgcggatgctcacccccgac
tccccctcagtacgcatcgaggcgcgactccttccggagaacacctcgtaccgcgaggtg
gaatggaaggcggtcacccccaacggcatcgagacccccctcgccctcgtccggccggaa
ggtctcgaggccgtggtcaccgcccgcggcgacgggagtttcttcgtacggtgtaccagc
agaaacggcactgacacggtacgcctcatctcccagctcgagtgcacggccgagggcttc
ggccgactccacaaggatccgtactccttcatctccgcagggctctacgacgacagcaac
gggaaggtcacgccggggaacgagaaaggcatcgccaccgcccgggatgggatcaccata
gtgggattcaccgacctcgacttcggacccgacgggtcggacaccatcaccatccccatc
ttcgccctgagtgccgacccctaccggctccagatctggcgaggccatcccgaagccccg
gagagcgagctcctcgcagatgtgatctatcggaaagaccccgtctggaatgtgtatcag
gaggcccgctatcgcctcagacgaaggctccgaggcgtgcagtcgctctacttcctcacc
gaagccaagatgcacatgaagggtttcgtcttcgaacgccaagtgcgggcctactccacc
atccatgcccacgagtacgacgtgatctacggagacgactgcgagatcacctcgcagggt
gtggaacgcataggaaacaacgtcaccctcacgttcgaaaacctcgatttcggcgacgaa
ccaccgaagaacctcaccatctacggccgttcacgcaccgacaacaacagcatccagatc
cgtttcgagcaagaagaccgacggatcgtccacctcatagagttcccctactccgtggac
tccgtggaacgcacctacccccttccgcccctccctgcaggccgcatggatgtctcgttc
gtcttcctccccggctcctcgttcgacctcggttggttcaggttcggaagagaccccggt
ccctga
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integrated database retrieval system
