Spirochaeta thermophila DSM 6578: Spith_2167
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Entry
Spith_2167 CDS
T02016
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
stq
Spirochaeta thermophila DSM 6578
Pathway
stq03420
Nucleotide excision repair
stq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Spith_2167
03430 Mismatch repair
Spith_2167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stq03400
]
Spith_2167
Enzymes [BR:
stq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Spith_2167
DNA repair and recombination proteins [BR:
stq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Spith_2167
MMR (mismatch excision repair)
Other MMR factors
Spith_2167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
AEJ62422
UniProt:
G0GFM3
LinkDB
All DBs
Position
complement(2424479..2426530)
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AA seq
683 aa
AA seq
DB search
MVDLSYLETLNAEQREAVFHSGSPLLILAGAGSGKTRVITTKIAYLVDALGIPARSILAV
TFTNKAAREMYERALQLSPRTEGVMIKTFHSFGVWLLRLYGERLGLARDFAIYDDEDARA
LLSSILDGSQRRHLSRYAWAISRAKDYALGPEDDLSSILEDDDFPELYARYEDRLRDTGN
VDFGDLILLPLRLLKEHEDVRRKVHAAFRVVMVDEYQDSNVAQFFLLRELYGPETYLCVV
GDEDQSIYRFRGAEVRNILDFPDAFEGTHIVRLETNYRSTETILRAASGVIAHNEGRLGK
TLRPIRQGGDVIRILSFPSAEEEAAYWARFLREEGWEDVAVLYRAHYQSRLLELALAREG
VPYRVVGSLRFYEREEVKDLLAFLRLVLNPRDEVSFLRVINKPPRGIGAKSQKAIISHAR
GTGSTLVEVLREGVVPGKAGASMVEFARFLDHIGERLSRMDLASWMEDLLKESGLWDYYQ
GFDDYTARQKLENLQELLALARSYPGGRDGLLAFLEYVALEGSLDRGSGDGVVLITMHNT
KGLEFSKVIITGLEEGVFPSWAASSPEDIEEERRLFYVALTRAKDGLFLSWAQTRNIRGR
RSFQQASRFLREIPPECLSPSYEEEEEEDFPVGSRIYHDDYGYGMVVERRHNGNLLVVKV
RFETGYTCEFLPSYTPLERIRHE
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgatctttcgtatctcgagactctcaatgccgaacaacgagaagcggtctttcat
tccgggagtcccctcctcatactcgcgggggctggttccgggaagacccgcgtcatcacc
accaagatcgcctacctggtggacgccctgggtattcccgctcggtcgatccttgcggtg
accttcaccaacaaggctgcccgggagatgtacgagcgtgccctccagctctcaccccga
accgaaggggtgatgataaagaccttccattcgttcggtgtctggctcctgaggctctac
ggagaacgcctgggcctcgctcgggatttcgccatctatgatgacgaggatgcacgcgcg
ctcctctcttcgattctcgacggcagccaacgccgacatctctcccgctatgcgtgggcg
atctcgagggcgaaggactacgcactcggtcctgaagatgacctctcctccatactggag
gacgatgacttcccggagctctacgcgcggtacgaggatcggctcagggatacggggaac
gtggacttcggtgacctcatcctcctccccctcagactgctcaaggaacacgaggacgtg
aggcgcaaggtccatgccgcgttccgggtggtgatggtcgacgagtaccaggactcgaac
gtggcgcagttctttctcctcagggagctctacgggcctgagacgtacctctgcgtggtg
ggcgacgaagatcagtcgatctaccggttccggggggccgaggtgcggaacatcctcgac
ttcccggatgccttcgagggtactcacatcgttcgactcgagacgaactaccgatccacc
gagaccatcctgagagccgcctcaggggtgatcgcccacaacgaggggcgtctcggcaag
acactgaggccgatacgacaggggggggatgtgatccggatcctctcgttcccgtcggcg
gaggaggaggcggcgtactgggcacgattcctccgtgaggaggggtgggaggacgtcgcc
gtcctctaccgggcccactaccagtccaggctgctcgagctcgccctcgcaagggaaggg
gtaccctaccgggtggtgggatcgctccggttctatgagcgggaggaggtgaaggatctc
ctggccttcctgcgcttggtgctcaatccccgtgacgaggtctccttcctcagggtgatc
aacaagccgccccgggggatcggcgcgaagagccagaaggccatcatctcgcacgcgcgt
ggcactggatcgacgctggtggaggtgctccgagagggagtggtcccgggtaaggcgggg
gcctcgatggtggagttcgcccggttcctggatcacatcggggagcggctctcccgtatg
gacctcgcttcctggatggaggacctgctcaaggagagcgggctctgggactactatcag
ggattcgacgactacaccgcccgtcagaagctggagaacctccaggagctccttgccctc
gcccggtcgtatcccggaggcagggacggtctcctcgcctttctcgagtacgtggcgctc
gaagggagcctggacaggggatcgggtgacggggtggtgctcatcaccatgcacaacacc
aaggggctcgagttctcgaaggtcatcatcacgggcctggaggagggcgtctttccctca
tgggcggcttcgagtcccgaggatatcgaggaagaacggagactcttctacgtggccctc
acgcgggcgaaggacgggctcttcttgagctgggcccagacgagaaacatcaggggcagg
aggagcttccagcaggcctcacggtttctcagggagatccctcccgagtgtctctccccc
tcgtacgaagaggaagaagaggaggacttccccgtggggagcaggatctaccacgacgat
tatggatacggtatggtggtggagcgccggcacaacgggaacctcctggtggtgaaggtc
cgcttcgagacagggtacacgtgcgagttcctgccttcgtacaccccgctcgagaggata
cggcatgagtga
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integrated database retrieval system
