Winmispira thermophila DSM 6578: Spith_2280
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Entry
Spith_2280 CDS
T02016
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
stq
Winmispira thermophila DSM 6578
Pathway
stq03030
DNA replication
stq03430
Mismatch repair
stq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Spith_2280
03430 Mismatch repair
Spith_2280
03440 Homologous recombination
Spith_2280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stq03032
]
Spith_2280
03400 DNA repair and recombination proteins [BR:
stq03400
]
Spith_2280
Enzymes [BR:
stq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Spith_2280
DNA replication proteins [BR:
stq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Spith_2280
DNA repair and recombination proteins [BR:
stq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Spith_2280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_5
RuvB_N
AAA_30
AAA_16
AAA_22
AAA_14
DUF815
ResIII
RCF1-5-like_lid
Glyco_tranf_2_5
AAA_24
AAA_assoc_2
AAA_18
AAA_19
nSTAND3
AAA_2
Rad17
TsaE
Mg_chelatase
RNA_helicase
PIF1
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AEJ62535
UniProt:
G0GG59
LinkDB
All DBs
Position
complement(2541498..2543030)
Genome browser
AA seq
510 aa
AA seq
DB search
MSFEVTANRRRPQTFKDLKGQEFVVSTLTNALKAGRVAHAYLFSGPRGVGKTSAARILAK
ALNCEQGVTPEPCGTCTSCKEISQGTAIDVIEIDGASNTSVNDVRVIREEVLFAPGKARY
KVYIIDEVHMLSNSAFNALLKTIEEPPPYVVFIFATTELQRVPATIRSRCQQYHFRLISP
EVIASLLREAASEMQVEVEEEALSWIAKEADGSLRDAYTLFDQVVSFSEGRLSYALIQEK
LGLVGFERLQAVVEACVREEVKGALDLVHEILMSGVSVEQCVVDLAEYFRALTLVEAGIE
RESILGVAPSRFSKSVRTAFSPAQLERAMELILETYRNIRYSLNQRYDLELLVSRLAHLR
RWVSSEDLVSRLERLRAGLVGGAVQASPPPQGAPDSREEGAEPRSPGEIREAVLARARAH
SPTLQAALSQGQWRIQGRRVEILFSSKAPLALCEEQVDVIKRLFEEVAGRGVECVLGRIR
EQEDRSPGEEPQIEEPVEQVRRIFKGEIVK
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttgaggtgaccgccaacaggcgaaggccgcagacgttcaaggatctcaagggc
caggagttcgtggtctccaccctcaccaatgcgttgaaggcggggcgtgtggctcacgcg
tacctcttctcgggacctcgcggggtgggaaagacgtccgcagccaggatactggcgaag
gctctcaactgtgagcagggcgtgactcccgaaccgtgcgggacgtgcaccagctgcaaa
gagatctcccagggtaccgccatcgatgtgatcgagatcgatggtgcttccaacacgtcg
gtgaacgacgtcagggtgatacgtgaggaggtcctcttcgcccccggcaaggcgcgctac
aaggtgtacatcatcgacgaggtgcacatgctctccaacagcgccttcaacgccctcctc
aagaccatagaagagccgcctccctacgtggtcttcatcttcgcgaccaccgaactccag
agggtgcctgcaaccatccgatcgaggtgtcagcagtatcatttccggctcatctctcca
gaggtgatagcgagcctcctcagagaggcggcctcggagatgcaggtggaggtcgaggag
gaggctctttcctggatcgcaaaggaagccgacggatccttgcgcgatgcctacaccctc
ttcgaccaggtggtctccttttccgaggggaggctgtcgtacgccctcatccaggagaag
ctgggtctcgtggggttcgaacgcctccaggcagtggtcgaggcctgtgtgagggaagag
gtgaaaggcgctctcgatctcgtccatgaaatcctgatgtccggggtgtcggtcgagcag
tgcgtggtggatcttgccgagtactttcgggcgctcaccctggttgaggccggcatcgaa
cgggagagcattctgggggtcgcaccctcgcggttctcgaaatcggtgcgtacggccttt
tctcccgcccagctcgagcgggcgatggaactgatcctggagacgtatcgcaacatacga
tattccctcaaccagcggtatgatctcgaactcctcgtctcccgactcgcccaccttcgc
aggtgggtctcttccgaggatctggtctcgagactcgaacgcctgcgggcggggctcgtc
ggaggagcggttcaggcctctcctcctccccagggtgcgccggattcccgagaggagggt
gcggaaccccggtcccctggagagatcagggaagcggtgctcgcaagggcccgcgcccac
tcccccacgctccaggcggctctttcacaggggcagtggcggatccagggacgacgggtg
gagatcctgttctcttccaaggctcccctcgccctttgcgaggaacaggtggatgtcata
aagagattgttcgaggaagtggcggggaggggtgtggagtgtgtcctgggacggatacga
gaacaggaggacaggagcccgggggaagaacctcagatcgaggagccggttgaacaggtt
cggcgtatattcaaaggcgagatcgtgaagtga
DBGET
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