Sebaldella termitidis: Sterm_1747
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Entry
Sterm_1747 CDS
T01123
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
str
Sebaldella termitidis
Pathway
str03030
DNA replication
str03430
Mismatch repair
str03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
str00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sterm_1747
03430 Mismatch repair
Sterm_1747
03440 Homologous recombination
Sterm_1747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
str03032
]
Sterm_1747
03400 DNA repair and recombination proteins [BR:
str03400
]
Sterm_1747
Enzymes [BR:
str01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sterm_1747
DNA replication proteins [BR:
str03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Sterm_1747
DNA repair and recombination proteins [BR:
str03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Sterm_1747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF1348
Motif
Other DBs
NCBI-ProteinID:
ACZ08605
UniProt:
D1AIM1
LinkDB
All DBs
Position
1880803..1884171
Genome browser
AA seq
1122 aa
AA seq
DB search
MMREEFVHLKLHTEYSLLEGVGKIEEYLDRAKKLDIKQLAVTDTAMFGVVEFYEKAFKKG
IKPIIGLEIFMDGFFSEGEYSLTLLARNQTGYKNLCKLSSLSFSRFNRSRNKIRYEELKK
HSEGLFILSGGINSELTESILTYKYSEFKNIITKLVQDFGEYFYVEVPAAERLKDKVKLY
IEMAEECNAEYVAANDVYYPNFGDSILQKIMISIKDGTKINSENTELKYNDLYLKSAEQM
KENFSGYEKAIENSLKIARECNVSFEFDKFKFPEYNLPEGKSETEYIRELVYDGLKKKYG
EPLEEKITERAEYELDIINKMGYNGYFIIVWDFIKYAKDNGIYVGPGRGSSAGSIVSYAL
NITEVDPIKYNLIFERFLNPERISMPDIDIDFDQEQREQVIDYVVKKYGHEKVAHIITFG
TLKARAAIRDVGRVLDINLKKVDKVAKLIPHFSELEDAVKNVRELKTLYNSDSEVRDMID
YSLKLEGKVRHASVHAAGMVISKDVLDDEIPTYSDGRASFLSTQYQMKELEDLGILKMDF
LGLKNLTILRKTMENIKITQGKVMVLDDIPLDDKETYKMLTAGDTLGVFQCESIGIRRLM
QKMKIEKFEDIVALLALYRPGPLRSGMVDDFIASKNEGAAIKYPHEALIDVLSETYGVIL
YQEQVLKIVNVLANYTMGEGDSLRRAMGKKIPELMAQNREVFIKRAVENNITPDKAEEIF
NLIDKFSGYGFPKSHSVAYALVAYWTAYLKTNYFKEFFAATMSTEMYNIDRLSLFINEAR
DKGVKVLLPDVNLSAYEFLAEKDGIRFGLLAIKHVGINIVKKVIEVRKNEKFDSYEDFVY
NLKKEGLNKKQLEAFVFSGSLDKIHNNRKEMFSSIDRVLEWCEKKFNSEEDLQMILFGGK
SQKIGLFSMEKSEEYSESLLLEKEKEFLGVYLSKHPLDNYKLLMRTIDKTRMDSLKQGKR
ARVIGLVKDIKKMITKKTGEPMARFFVEDYGTKAEVVCFPRDYINYSHEIFDGNAVIVEG
TVSSDNSGRLNIHMTNISSLKDIDENHRLKLYILIDEETKGQMVQVKKVITENKGPNQVY
FAVNEAGKKEIIKLSEKYRVSITAKFIEELSQLFSYKKIKIK
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgatgagagaagagtttgtacatttgaaactgcatacagagtattcacttctggagggc
gtaggcaaaatagaagaatatctggacagggcgaaaaaactggatataaagcaattagct
gtgactgacacagctatgtttggcgtggtcgaattttatgaaaaggcttttaaaaaggga
ataaagcctataattggtcttgaaatatttatggacggttttttttccgaaggagaatat
tcacttactctgcttgcgaggaaccagacaggatataaaaatctgtgtaaactttcatca
ctgtcattcagcagatttaacagaagcagaaataaaataagatatgaggaattaaaaaaa
cattccgaaggtctgtttatactttccggaggaataaacagcgagcttaccgaatctata
ctgacttataaatacagtgaatttaaaaatataataacgaagcttgtacaggatttcggt
gaatatttttatgtagaagtacctgccgctgaaaggctgaaggataaagtaaagctgtat
atagagatggcagaggaatgcaatgcggaatatgtggctgccaatgatgtatattatcct
aatttcggtgacagtatcctccagaaaataatgatttcgataaaggacggaactaaaata
aattctgaaaatacagagttaaaatataatgatctttatctgaaatcggcggagcagatg
aaggaaaatttttcaggatatgaaaaagcgattgaaaatagtttgaaaatagcaagagag
tgcaatgtaagctttgaatttgataaatttaaatttcccgaatataatcttccagaggga
aaaagtgagacagagtatatcagagagctggtatatgacggactgaaaaagaaatacggc
gagcctttggaggaaaaaataacggaaagagcagagtatgagcttgatataataaataaa
atgggatataacgggtacttcataatagtatgggattttataaaatatgcaaaggataac
ggtatttatgtgggaccgggaagaggttcgtcggcggggagcatagtatcatatgctctg
aatataaccgaggtagatcctattaagtataacctgatttttgaacgttttttgaatcct
gaaagaatttcaatgcctgatatagatatagattttgatcaggaacaaagagaacaggta
atagattatgtagtaaaaaaatacggacatgaaaaggtagctcatattattacattcggg
actctgaaagcaagggcggcaatcagggacgtaggaagagttcttgatattaatctgaaa
aaagtagataaagtagcaaaattaataccgcatttttccgagctggaagatgcagtaaag
aatgtacgcgaattaaaaactctttataacagtgacagtgaagtaagagatatgatagat
tattctcttaagctggaggggaaagtaagacatgcttcggttcatgcggcgggtatggtt
atttccaaagatgttttggatgatgaaattcctacttattcagacggtcgggcatctttt
ctgtctacgcagtatcagatgaaagagctggaggatctgggaatactcaagatggatttt
ctcgggctgaaaaacctgactatcctcagaaaaacaatggaaaatataaaaataacacag
ggaaaagtcatggtactggatgatatacctcttgatgataaagaaacatataaaatgctt
accgcaggagacacactcggagttttccagtgtgagtccattggaataagaagacttatg
caaaagatgaaaatagaaaagtttgaagatatagtggcgcttttggctctgtacagaccg
ggacctctgcggagcggtatggttgatgattttatagcgagcaagaatgaaggagccgca
ataaagtatcctcatgaggccttaatagatgtgttgagcgaaacatatggcgttatactt
tatcaggaacaggtactgaaaatagtaaatgtacttgccaattatacaatgggtgaagga
gacagtctccggcgtgcaatgggtaaaaaaattccggaattaatggcacagaacagggaa
gtattcataaaaagagctgtagaaaataatattactcctgataaggctgaggagatattt
aacctcatagataaattctcgggatacggatttccaaaatcccactcagtggcttatgct
ttggtggcttactggacggcatacttgaaaactaattattttaaagaattttttgctgcg
actatgtctacggaaatgtataatatagacaggctttcactgtttataaatgaggcaaga
gataagggagtgaaagttcttcttccggatgttaatttgtcagcatatgagtttcttgca
gaaaaagacggaatacggttcggacttctggcaataaagcatgtgggaataaacatagta
aagaaagtaattgaagtcagaaaaaatgaaaaatttgattcttatgaagattttgtatat
aatctgaaaaaagagggactgaataaaaaacagctggaagcatttgtattttccggaagc
cttgataaaatacataataacagaaaagagatgttttcatcaatagacagggttttggaa
tggtgtgagaaaaaatttaattccgaagaggatcttcagatgatattattcggggggaaa
tctcagaaaataggattgttttcaatggaaaaatccgaagaatacagtgaaagtcttctt
ttggaaaaggaaaaagaatttttgggggtttatctttcgaagcatcctcttgataattac
aagcttcttatgagaacaatagacaaaacccgtatggacagtctgaaacaagggaaaaga
gcaagggtaataggtcttgtaaaagatataaaaaaaatgattaccaaaaaaactggagaa
ccaatggcaagattttttgtggaggattatggtacaaaagccgaagtggtttgttttccg
agggattatataaattacagccatgaaatatttgacgggaatgcggtaatcgtggaagga
acagtatcttccgacaacagcggcaggcttaacattcatatgacaaatataagttctcta
aaggatatagatgaaaatcacagactgaaactgtatatactgatagatgaggaaacaaaa
ggacaaatggttcaggtgaaaaaagtcataacagaaaataaaggaccgaatcaggtatat
tttgcagtaaatgaagccggtaaaaaagagataataaaactaagcgagaaatacagagta
agcattacagcaaaatttatagaggagctttcacaattattcagttataaaaagataaaa
ataaaatag
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