Sebaldella termitidis: Sterm_2355
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Entry
Sterm_2355 CDS
T01123
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
str
Sebaldella termitidis
Pathway
str03420
Nucleotide excision repair
str03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
str00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Sterm_2355
03430 Mismatch repair
Sterm_2355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
str03400
]
Sterm_2355
Enzymes [BR:
str01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Sterm_2355
DNA repair and recombination proteins [BR:
str03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Sterm_2355
MMR (mismatch excision repair)
Other MMR factors
Sterm_2355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
AAA_12
DEAD
RHG29_45_N
Terminase_6N
CarD_TRCF_RID
HTH_39
Motif
Other DBs
NCBI-ProteinID:
ACZ09208
UniProt:
D1AL65
LinkDB
All DBs
Position
complement(2501274..2503448)
Genome browser
AA seq
724 aa
AA seq
DB search
MSILDGLNKEQREAAEHIDGPVLILAGAGSGKTRTVTYRIAHMVREKGVSPLNILALTFT
NKAAKEMKERAEALVGNDIHNLQISTFHSFSVRLLRIYGEKLGYGKNFNIYDTDDQKSLI
SKIMKELNVQDDSTPGKIANRISKLKEKGIDIKTIEREVDLRVPSNRVFFDIYDKYDKTL
RSSNAMDFSDLILNANKLLDNSEVLERVQERYRYIIVDEYQDTNDLQYEIINKIASKYNN
ICVVGDEDQSIYAFRGANINNILNFERDYKNALVIKLEKNYRSTERILNAANELIRNNKS
SRGKKLWTDAGKGEKIQVFNAANTFDEANFIAEEIVRKNREGVPFKDMAVLYRTNAQSRV
LEEKMLLNNIKYRVYGGMQFFQRREVKDLLAYLSVINNIQDNLNFVRIINVPKRSIGDKS
VAKFAEIAAQKGISLFESLKYIDEVSGLRAAAKEKLKDFYRLLTDVLENLEHMTVSEIFQ
EILNRTKYIDSIEDNKEDRVKNIEELMNSIREIEREYPGITLSEYLEFISLTSATDSMDD
EENFVKLMTIHSSKGLEFDFVFIAGMEEGLFPGEASILNDEDLEEERRLCYVAITRAKKE
LRLSHASERMLWGQSSYGRPASRFIGELSQDELEFLNKKERKSELFRNTEPLKSENFKPM
TDIENFNPYKKAAVDARYKIGEYVNHIKFGKGKVTGIDNKSVTVDFMTGEKKIALALADR
FLKG
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgagtatattagacggtctgaataaagaacaaagagaagcagcagaacatatagacggt
cctgtgctgatactggcgggtgcaggaagcggaaagacaagaacagtaacatacagaata
gctcacatggtaagggaaaagggcgtatcacctttgaatatactggctcttacatttacc
aacaaagcagcaaaagaaatgaaagaaagagcagaggctctggtaggaaatgatattcat
aatctgcagatttctacatttcactcattttctgtaagacttttaagaatatacggcgag
aagttgggttatggaaaaaatttcaatatttatgatactgatgatcaaaaatcattaata
agtaaaataatgaaggaattgaatgtacaggatgacagcactcccggtaaaatagccaac
agaataagcaagctgaaggaaaaaggaatagatataaagacaatagaaagagaagtagac
ctgcgtgtaccttcaaacagagtatttttcgatatatacgataaatatgataaaactctg
aggtccagtaatgcaatggatttttcggatttgatactgaatgcgaataagcttttggat
aattcggaagtattggaaagagtacaggaaagatacagatatataatagtagatgagtat
caggatactaatgatcttcagtatgaaataataaataagatagcatccaagtataacaat
atctgtgtagtcggtgatgaagaccagagtatttatgctttcagaggggcaaatataaat
aatatactgaactttgaacgtgattacaaaaatgctttggtaataaaacttgaaaaaaat
tacagatccactgagagaatacttaatgcagcaaatgaactgatcagaaataataaatcc
tcaagagggaagaagctctggacagatgcaggaaagggcgaaaaaattcaggtttttaat
gcagcaaatacatttgatgaagctaacttcatagcagaagaaatagtcagaaaaaacaga
gagggtgttcccttcaaggatatggcggttctttacagaactaatgcccagtcaagagta
cttgaggaaaaaatgcttctgaataatataaaatacagagtttacggaggaatgcagttt
ttccagagaagagaagtaaaagatcttttggcttacctgagtgtaataaataacatacag
gataatctgaattttgtaagaataattaatgtgccgaaaagatctatcggggataagtca
gtggcaaaatttgcggaaatagcagcacaaaagggaatatcattatttgagtcgttaaaa
tatatagacgaagtatcaggattgcgtgccgctgcgaaagaaaaactaaaagatttttac
agactgctgacagatgttctggaaaatcttgaacatatgacagtaagtgagatatttcag
gagatactaaacagaacaaaatatattgattccatagaggataataaagaagatagagta
aagaatatagaagaattaatgaatagtatacgtgaaatagaaagagaatatccggggatt
acattaagtgaatatctggaatttatttctcttacatctgctacagacagcatggatgat
gaggaaaattttgtgaagctcatgacaatacacagttcaaaaggacttgaatttgatttt
gtattcatagcgggaatggaagaggggctttttcccggggaagcatctattctgaatgat
gaagatctggaagaggaaagaagactttgctatgtagcaataacaagagcaaaaaaagaa
ttgagactgtcacatgcttccgaaagaatgctttgggggcagtcgagttacgggcgtcct
gcttcgagatttattggtgaattatcacaggatgaactggaatttttgaataaaaaagag
agaaaatcagaattatttagaaataccgagccgctaaagtcagaaaactttaaacctatg
acagatatagaaaattttaatccttataaaaaagcagctgtagatgccagatataagatc
ggggaatatgtaaaccacataaaattcggaaaaggcaaggtaacaggtatagataataaa
agcgtaacagtggattttatgacaggggaaaagaaaatagccttagcattggccgacaga
ttcttgaaaggatag
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