Sebaldella termitidis: Sterm_3060
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Entry
Sterm_3060 CDS
T01123
Name
(GenBank) Pseudouridylate synthase-like protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
str
Sebaldella termitidis
Brite
KEGG Orthology (KO) [BR:
str00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
str03016
]
Sterm_3060
Enzymes [BR:
str01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Sterm_3060
Transfer RNA biogenesis [BR:
str03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Sterm_3060
Prokaryotic type
Sterm_3060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
KH_2
KH_1
KH_KhpA-B
crAss001_48
Motif
Other DBs
NCBI-ProteinID:
ACZ09902
UniProt:
D1AP68
LinkDB
All DBs
Position
complement(3201216..3202046)
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AA seq
276 aa
AA seq
DB search
MEIRDLEKTGYFGYLFFIRYDGTKFDSFDENKDKTSVKGEFKKLLDENNISYYKGIQQAG
RTDKDVSAEENILYINTKQELKLENFRNSSVILEIFDIKKTLPYLELPKLIEKRHYIYRY
PKDRIKSSIEEIDKKCRELSGKHDVSAFTTKKGRELKEKIRELAVYYENQELHFTGSSFM
PQQVRIMSGYILTGKKQPLEGRYLTLEKIIFSQELEDMIIFEDNAISEINIEKIERNREF
LFFYVKKSKKGEVIGNKGKNIKKLRGKYGKIIIKEI
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcagagatttagaaaaaacaggatattttggatatttattttttatcagatat
gacggtacaaaatttgattcatttgatgaaaataaagataaaacaagtgtaaaaggtgaa
tttaagaagctgcttgatgaaaataacatttcttattataaggggatacagcaggcgggg
agaactgacaaagatgtcagtgcagaagaaaatatactgtatattaacacaaaacaggag
ttgaaactcgaaaattttagaaacagctctgtgattcttgagatttttgatataaaaaaa
acacttccttatctggaactgccgaagctcatagaaaaaagacattatatttacagatat
ccaaaagacagaataaaaagcagcattgaggaaatagataaaaaatgtcgggagctcagc
ggaaaacatgatgtcagtgcttttaccacaaaaaaaggcagggaactaaaagagaaaatc
agagagcttgcagtatattatgaaaatcaggagctccactttacaggaagttcttttatg
cctcagcaggtgagaattatgagcgggtatatactgactggaaaaaagcagccgcttgaa
ggaagatatctgacactggaaaaaataatattttcacaggaacttgaggatatgataatt
tttgaagataatgcaatatctgaaataaatatagagaaaatagaaagaaacagagaattt
ttatttttttatgtaaagaaatccaaaaaaggggaagtaataggaaataaggggaaaaat
ataaaaaaactaagaggaaaatatggtaaaataattataaaagaaatatag
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