Sebaldella termitidis: Sterm_3799
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Entry
Sterm_3799 CDS
T01123
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
str
Sebaldella termitidis
Pathway
str03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
str00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Sterm_3799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
str03021
]
Sterm_3799
03019 Messenger RNA biogenesis [BR:
str03019
]
Sterm_3799
Transcription machinery [BR:
str03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Sterm_3799
Messenger RNA biogenesis [BR:
str03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Sterm_3799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
OB_RNB
AAA_25
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
ACZ10633
UniProt:
D1AG07
LinkDB
All DBs
Position
complement(4035762..4037006)
Genome browser
AA seq
414 aa
AA seq
DB search
MENIFEMKLTELRKKAKEYGITGFSTMGKSDLITNIYIEEAKKDNIILGSGRLDMMSDGY
GFLRESSVGPDIYVSASQARKFALRNEDIVLGEVREPIGTEKNYALIKTLLINGDAPEKS
TNRPFFDDLTPSYPEEKLNLSSASLSSRIIDLIAPIGKGQRGLIVAPPKAGKTILLSTLA
NDIINNNPEVELWILLIDERPEEVTDIKENVRDAEVFSATFDEDPSVHIKVTEDVLEKAK
REVEKGKDIVILMDSLTRLARSYNIVVPSSGKLISGGIDPKALYYPKRFLGAARNIRKGG
SLTIIATALIETGSKMDDIIFEEFKGTGNMEVILERSLAELRIFPAIDVLKSGTRKEEIL
LDEKTLKTIWNFRRYLSNYNEAEAVKKLIDLIKKTKSNDELINMISKDNSKITM
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatattttcgaaatgaaattaacggaattaagaaaaaaagcaaaagaatatggg
ataactggtttttccacgatggggaagtcagatcttataacaaatatctatattgaagaa
gctaaaaaagacaatattatattaggatcaggaagactggatatgatgtccgacggatac
ggatttttaagagaaagtagtgtaggtcctgatatttatgtatcagcatctcaggcgaga
aaatttgcacttagaaatgaagatatagttttgggggaagtaagagaaccaataggaaca
gaaaaaaattatgcacttataaaaactcttcttataaatggagatgctcctgaaaaatca
acgaacagaccgttttttgatgatcttacaccttcgtatccggaagaaaagctgaattta
tcatcggcaagtctgtcttccagaataatagacctgatagcaccgataggtaaagggcag
agaggtctgatagtagcaccgccgaaagcaggtaaaacaatacttttatctactctggca
aatgatattataaataataatccggaagtagagctgtggatactgcttattgacgagaga
ccggaagaggttaccgatataaaggaaaatgtacgtgatgcggaagttttttcggcaaca
tttgatgaagatccgagtgtacatataaaggtaacagaggatgtacttgaaaaggcaaaa
agagaggtagaaaaagggaaggatatagtaatattgatggatagtctgacaagacttgcc
agatcatataatatagtagttccttcaagcggaaagctgatatccggaggtattgacccg
aaagctctttattatccgaaaagatttctcggagctgcaagaaatataagaaaaggcgga
agtctgactataatagctacagcgcttatagaaacaggaagtaaaatggatgacataata
tttgaggaattcaagggaacaggaaacatggaagtaattctggagagatctctggcagaa
ttaagaatattcccggcaatagatgtattaaagagcggaacaagaaaagaggaaatactt
cttgatgaaaaaacattaaagacaatatggaatttcagaagatatctaagcaattataat
gaggctgaggcagtgaaaaaactgatcgaccttattaagaaaacaaagtcaaatgacgaa
ctgataaatatgatatcaaaagataattcgaaaataacaatgtaa
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