Streptococcus sp. A12: ATM98_00020
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Entry
ATM98_00020 CDS
T05522
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
stra
Streptococcus sp. A12
Pathway
stra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ATM98_00020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stra03019
]
ATM98_00020
Messenger RNA biogenesis [BR:
stra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ATM98_00020
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
DivIVA
ATP-synt_B
dUTPase
KH_2
Motif
Other DBs
NCBI-ProteinID:
AMP66187
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All DBs
Position
2882..4489
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AA seq
535 aa
AA seq
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MEFGIAIVFAAIIGLVIGYVGISVKMKASKEAAELTLLNAEQEATNLRGQAEREADLILK
EAKHESSSLKKEALLEAKEEARKYREEVDAEFKSERQELKQLETRLAERSNNLDRKDDNL
TSKEQALEQKEQSLSDRTKHIDAREEQLHELEKKKEEELEKIASLTQSEARDIILTQTEE
RLSKEIATRIREAEVEVKERSDKVAKDILVQAMQRMAGDFVAEQTNSTVHLPDDGMKGRI
IGREGRNIRTFESLTGVDVIIDDTPEVVTLSAFDPIRREIARMTMESLLKDGRIHPARIE
ELVEKNRLEIDQRIREYGEAAAYEIGAPNLHPDLMKIMGRLQFRTSYGQNVLRHSIEVAK
LSGIIASELGENATLARRAGFLHDIGKAIDREVEGSHVEIGTELARKYKEHPVVVNTIAS
HHGDVEPESVIAVIVAAADALSAARPGARSESLESYIKRLQDLEEIANGFEGVKTSFALQ
AGREIRIMVSPEEVKDDKLTILAHDIREKIESNLEYPGNIKVTVIRELRAIDYAK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggaatttggaattgcaattgtttttgccgcaatcattggtttagtcattggatatgta
gggatctcagtcaagatgaaagcatcgaaagaggctgcagaacttactcttttaaatgct
gaacaagaagcaacgaatttacgtggacaggcagagcgcgaagctgatttgattttgaaa
gaagctaagcacgagtctagttcacttaaaaaagaagcacttttggaggcaaaggaagaa
gccagaaaatatcgagaagaagtcgatgctgagtttaaatcagagcgtcaagaattaaaa
caattagaaacccgcttagcggaacgttcgaataatcttgatcgcaaagatgacaatctt
acgagcaaagagcaagctcttgaacaaaaagagcaaagtctttcagatagaactaaacac
attgatgcgcgtgaagaacaattacatgagctagaaaagaagaaagaagaagaattagaa
aaaattgcttctctgactcaatcggaagcacgtgatattatcttaacgcaaacagaagaa
cgactctccaaagagattgcgactcgaattcgagaagcagaagtggaagtgaaagaacgt
tcagataaagttgcaaaagatatcctggttcaagccatgcaacggatggccggggatttt
gtggcagaacagaccaactcaacggttcatttaccagatgatggaatgaagggtcggatt
attggtcgcgaaggtcgaaatatccgaaccttcgaaagcttgacaggtgtggatgtgatt
attgatgacactccagaagtagtcaccctgtctgcatttgatccgattcgtcgggaaatc
gcacgaatgaccatggaaagtctcttgaaagatggtcgcatccatccagctcggattgaa
gagttggtagagaagaaccgtttggaaattgaccaacggattcgtgaatatggtgaagca
gcagcctatgaaattggcgcaccaaatctacatcctgatttgatgaagattatgggacgc
ttgcaattcagaacttcttatggacagaacgtcttgcgtcactccattgaggttgctaag
ttatctggtattattgctagtgagcttggtgaaaatgctaccttggctcgtcgagctggt
ttccttcatgatattggtaaagccatcgaccgtgaggtagaaggtagccacgtagaaatt
ggtactgaattagctcgtaaatacaaagagcaccctgttgttgtcaatacgattgccagt
caccatggtgatgtcgaaccagaaagtgtcatcgcagttattgttgcagcagctgatgcc
ttgagtgcagcgcgtccaggtgctcggagcgagtctcttgaaagctacatcaaacgcctg
caagatcttgaagaaattgcaaatggctttgagggagttaagaccagctttgccttgcaa
gcaggtcgtgaaattcgaattatggtcagccctgaagaagtcaaggatgataagttgacc
atcttggctcatgatatccgtgagaagattgagtccaacttggagtaccctggtaacatc
aaggtaaccgttattcgtgaattacgtgccattgattatgcaaaatag
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