Streptococcus sp. A12: ATM98_01325
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Entry
ATM98_01325 CDS
T05522
Name
(GenBank) RNA polymerase subunit sigma
KO
K03086
RNA polymerase primary sigma factor
Organism
stra
Streptococcus sp. A12
Pathway
stra02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
stra00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ATM98_01325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stra03021
]
ATM98_01325
Transcription machinery [BR:
stra03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ATM98_01325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
DprA_WH
DUF2316
DBD_HTH
Motif
Other DBs
NCBI-ProteinID:
AMP66426
LinkDB
All DBs
Position
249144..250256
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AA seq
370 aa
AA seq
DB search
MAKEQKDITTLDVQIAEFIRSHKKSGTATDDEINDQLVIPFTLDADGIDDLLQRIQDAGI
SITDKEGNPSARVLNNEEEEPELTDEELLGSNSAKVNDPVRMYLKEIGVVPLLTNEEEQE
LAILVEQGDLEAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYTK
GFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQI
AERMDMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRVVLREQ
LDEVLDTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSR
SKPLRDFIED
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagaacaaaaagatatcacaactttagatgtccaaattgcagagtttattcgt
agtcataagaaaagtggtactgcaacagatgatgaaatcaatgatcaattggtcattcct
tttaccttggatgccgatggaattgatgatttgttgcaacggattcaagatgctggaatt
tccatcacagataaggaaggaaatccaagcgcgcgtgtcttaaacaacgaagaggaagaa
ccagagttgacggatgaagaattgcttggaagcaactctgccaaggtcaatgacccagta
cggatgtacttgaaagaaattggggtcgttcctcttttaactaatgaagaagagcaagaa
ttggccatcttggtggaacaaggtgatttggaagccaagcaacgtctggcagaagccaac
cttcgtttggttgtttccattgcgaagcgctatgttggtcgtggtatgcaattcttggat
ttgatccaagaaggaaatatgggcttgatgaaggccgttgataagtttgactataccaaa
ggattcaagttctctacttatgcgacttggtggatccgtcaggccatcactcgtgctatt
gcagaccaagcccgtactattcgaattcctgtacacatggtggaaaccatcaacaagttg
gttcgtgaacaacgcaatcttttgcaagaattgggacaagatccaacacctgaacaaatc
gctgaacgcatggatatgacgccagacaaggtgcgtgaaatcttgaagattgcccaagaa
cctgtttctcttgaaacgccaatcggagaagaagacgatagccatttgggcgatttcatc
gaagatgaagtgattgaaaacccagtggactacaccactcgtgtggttctacgtgaacaa
ttggatgaagtcctcgacacccttaccgaccgtgaagaaaatgttttgcgtcttcgtttt
ggtctcgatgatggaaaaatgaggactttggaagatgtggggaaagtcttcaacgtgacc
cgtgaacggatccgtcagatcgaagccaaagcccttcgcaaactccgccacccaagcaga
agcaaaccattgcgtgactttatagaggattaa
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