Streptococcus sp. A12: ATM98_01415
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Entry
ATM98_01415 CDS
T05522
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
stra
Streptococcus sp. A12
Brite
KEGG Orthology (KO) [BR:
stra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stra03016
]
ATM98_01415 (truB)
Enzymes [BR:
stra01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ATM98_01415 (truB)
Transfer RNA biogenesis [BR:
stra03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ATM98_01415 (truB)
Prokaryotic type
ATM98_01415 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DKCLD
Motif
Other DBs
NCBI-ProteinID:
AMP66441
LinkDB
All DBs
Position
272458..273384
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AA seq
308 aa
AA seq
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MMRKEIRKQDMNGIINLKKEAGMTSHDVVFKLRKILGTKKIGHGGTLDPDVVGVLPIAVG
KATRMVEFMQDEGKVYEGEITLGFSTTTEDASGEVVERTPVEAPLDATEVDRMIAQMVGE
MEQIPPMYSAVKVNGRKLYEYARTGEEVERPVRQVTIYEFTRISEIGYEEGLARFRFRVK
CSKGTYIRTLSVDLGQKLGYAAHMSHLTRTSAAGLTLDDALTLEEVAEKVGQGDLSFLHP
LEIGTGDLEKVELTVEEVGEVQVGRFIPVESEARELAAFYQGKLVAIMEKREELYKPRKV
FLTESVLQ
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgatgagaaaggaaatcagaaagcaagacatgaacggtattatcaacttaaagaaagaa
gcagggatgacctcgcatgatgtggtctttaaactgcgaaaaatcctaggtaccaagaag
attggccatgggggaacgctggatccggatgtggtgggagtgcttccgattgcagttggt
aaagctacgcgcatggtagagttcatgcaggatgagggtaaggtctacgagggagaaatc
actctgggattttctaccacaacggaggatgccagtggggaagtcgtagagcggacccca
gtggaagcccctttagatgcaacagaggtggaccgcatgattgcccagatggtgggagaa
atggagcagataccgcctatgtactcagcagtcaaggtcaacggacgtaagctctatgaa
tatgcgcggacaggagaagaagtggaacgtcctgtccgacaggtgacgatttatgaattc
acgcgcattagtgagattggctacgaggaaggactagcccgttttcgcttccgggtcaaa
tgcagcaaggggacctatatccggaccttgtcggtggatttgggtcaaaaactgggttat
gcagcccatatgtctcatctgacccgaaccagtgctgccggtttgacactggatgatgcc
ctgaccctggaagaggttgctgaaaaagtagggcaaggagatttgagcttccttcatcca
cttgagattggcaccggggatctggaaaaagtagagctgactgttgaagaagttggcgaa
gtccaagtgggacgctttattccagttgagagcgaagccagagagttagctgcgttttac
caagggaaattggtagccattatggaaaaaagggaagaactttacaaacctcgcaaggtt
tttctgacagaaagtgtgttacaataa
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