Streptococcus sp. A12: ATM98_01685
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Entry
ATM98_01685 CDS
T05522
Name
(GenBank) ATP-dependent helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
stra
Streptococcus sp. A12
Brite
KEGG Orthology (KO) [BR:
stra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stra03400
]
ATM98_01685
Enzymes [BR:
stra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ATM98_01685
DNA repair and recombination proteins [BR:
stra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
ATM98_01685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
DEAD
DUF2059
AAA_22
AAA_7
AAA_16
KdpD
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
AMP66493
LinkDB
All DBs
Position
329921..333604
Genome browser
AA seq
1227 aa
AA seq
DB search
MKPIEFLSPKQIQDLQVQEAQSDKEQKRTPEQIEAIYSSGTNILVSASAGSGKTFVMVQR
ILDQLHRGISIQQLFISTFTVKAATELKERLEKELEKSLKASQDEELKHHLAQQIAELPT
SDIGTMDAFTQRLVSKYGYLLGLSPTFRILQSASEQYLLKNDCFEQAFERFYEEQGTDRL
FSCLVKNFTGKGKSLAGFKDQVYALVDFLQSTADPQAWLEESFLKGYQDLDYDEALDQLA
QEVKEQLFELESFFTFHLANEGQAFSGAKYQENVTAIQDLIASLNEKSSQEAIFEVLERV
VLISRASGGRSLTITTRKEDLKELATAFNDERKERIEALRAAASQHYQLTYQIRFKDEPL
PLLVLLRDFVQAFSTAYLERKKQENAFEFGDISHFAIQILEEFPHIRSLYQERYHEVMVD
EYQDTNHTQERMLELLSNGHNRFMVGDIKQSIYRFRQADPQIFNDKFKAYQEEGADGKLI
LLKENFRSHVEVLEATNHVFERLMDEEVGEILYDQSHRLIAGNPEKKEPTPAYETEFLLY
DGSQDVAEEAEEDEQEGDSLSSGEVLLVIKEIIRLHNEEGVPFKDITLLTASRTRNDKVL
SSFEAYQIPIVADGGEENYLQSVEVMVLLDTLRTINNPLQDYPLVALMKSAMFEFDEDQL
ARLALQGREGKKAENLYEKLQHALDQTGSAPHLIDSSLREKLTSFMETLDAWRDYAQTHS
LYDLLWKIYQDRHYYDYVGALPNGAQRQANLYALTLRANDFESSSFKGLPRFISMIDKIL
ENQHDLANVAQAVPKDAVQLMTIHKSKGLEFPYVFILNTDKKFVGKELSTNAVISRKNGV
GIKYVANLPVESDQEGLPESVRLVIETLPYQRNVEEIRLAALSEQMRLLYVAMTRAERKL
YLVGKGRQDKLEEKKWGASVNGRLSPALRKEINCFQDWLYAIQAVFTQQHLAYQTRFVTD
QDLTPEQIGHLELKSSLPVDDLKDNRQSEEISRALDVLESVDRLNTQYQAAIQLPSVRTP
SQIKKFYEPIQDVEGVDFMEKADLPLPSFEFPTFGKEEAVTGVAVGSALHELMQRIPLTT
VPTMESLAMVLQEVNASPAVKKRIDLKKVLAFFQTDLGQLLLKEEDKVHREAPFAMLKTD
PASGQNFVVRGILDGYLLLEDQILLFDYKTDRYRNPQELLDRYQAQLELYAEALRRSYGV
EQVESYLILLGGEQLQVVSLADRKDPS
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaatagaatttttaagtcccaagcagattcaagacctccaagtccaggaggcc
cagtctgacaaggaacaaaaacggacccctgagcagatagaagccatctattcatcaggg
accaatattctggtctcggcttcggctggatctggaaagaccttcgtcatggtccagcgg
atcctggatcaattgcaccgggggatttccatccagcaattgttcatctcaacctttacc
gtcaaagcagcaaccgagcttaaggaacggttagaaaaagagttggagaaaagtctcaag
gctagccaggatgaggagctcaagcaccacttggcccaacaaattgcagaattaccaact
agtgatatcggaaccatggatgccttcacgcagcgcctggtttccaaatatggctattta
ttaggcctctcgccgaccttccgcatcctccaaagcgcgagcgagcagtacttgctcaag
aatgactgttttgaacaagcctttgagcgcttttatgaggagcaagggaccgaccgcctc
tttagttgcttggtcaagaactttacaggaaagggcaagtcgctagctggttttaaggac
caggtttatgccttggtagacttcctccaatccactgcggatccccaagcctggctagag
gagtctttcctcaaaggctatcaagatctggactatgatgaagccttggaccagttggcc
caagaggtaaaagagcagctctttgaactggaatctttctttaccttccacctggctaat
gaaggccaagccttttcaggggccaagtaccaagaaaatgtcaccgctattcaagactta
atcgctagtctcaatgagaaatcgagccaggaagccatctttgaggtcttggagcgggtg
gtcttgatctcccgtgccagcggaggacgaagcctgaccatcacgacacgaaaagaagac
ctgaaagagctagctacggccttcaatgacgaacgcaaagaacgcatcgaagccttgcgg
gcagcagcttcccagcactaccagctaacctatcagattcgcttcaaggatgaacccttg
cctttgctggtcttgctcagggactttgtccaagctttctccaccgcttatttggagcgc
aagaagcaggaaaatgcctttgaatttggcgacatcagccattttgctatccagatcctt
gaagaattccctcatatccggagtctctatcaagagcgctaccacgaggtcatggttgat
gagtaccaggataccaaccacacccaagagcggatgttggagctcttgtctaacggccac
aaccgcttcatggtgggagatatcaagcagtccatctaccgtttccgtcaggcggatcct
cagatttttaatgacaagtttaaggcctaccaagaagaaggggctgatggtaagttgatc
ctgctcaaggagaatttccgtagccacgtagaagtcttagaggcgaccaaccatgtcttt
gaacggctcatggatgaggaagttggggagattctctatgaccagagccaccgcttgatt
gcgggaaatccggagaagaaagagccgacacccgcctatgagacagagttcctgctctac
gatgggagtcaggatgtggctgaagaagctgaagaagatgagcaagaaggggatagccta
tcctcaggtgaagtccttttggtcatcaaggagatcatccgcctccacaacgaagaaggg
gttccctttaaggatatcacactcttgacggcgtctcggacccgcaacgacaaggtactg
tcttcctttgaagcctatcaaattcctattgtcgcagacgggggagaggaaaactacctc
cagtcggtcgaagtcatggtccttttggacactctccggaccattaacaatcccttgcag
gactatcccttggtggccctcatgaaatcagccatgtttgagtttgatgaggaccagttg
gcccgtttagccttacagggaagagaaggcaagaaggcagagaatctctatgagaaactg
caacacgcactagaccagacgggaagtgctcctcatttgattgattccagcttgagagag
aagctcaccagctttatggagacactagatgcctggcgtgactatgctcagacgcattct
ctctatgacctgctctggaagatttaccaggatcgccactattatgattatgtgggtgcc
ttgccaaatggagctcaacggcaggccaatctctatgccttgacccttcgggcaaatgac
ttcgaaagctcaagttttaaaggtttgccacgtttcatctccatgattgataagattttg
gaaaatcagcacgacttggccaatgtcgcccaagcagttcctaaggatgctgtccaactc
atgaccatccataagagcaagggacttgagtttccttatgtctttatcctcaatactgac
aaaaagtttgtcggcaaggaactttccaccaatgctgtcatcagtcggaaaaatggggtc
gggatcaagtatgttgcgaatctccccgtcgagtctgatcaagagggacttcccgagtcg
gtacgcttggtcattgagaccctgccttaccagcggaatgtcgaggaaattcgtctggca
gccttgtcggaacagatgcgcctcctctatgttgctatgacccgggcagagcgcaagctc
tatctggtgggcaagggccggcaggataagttagaagagaaaaaatggggagccagtgtc
aatggccgcttaagtccagctcttcgtaaggaaatcaattgtttccaagactggctctat
gccatccaggcagtctttacccagcaacacttggcctatcagacccgctttgtgactgac
caagacttgacgccggagcaaatcggtcacttggagttgaagtcttctctcccagtcgat
gacctcaaggacaaccggcaatcagaagagatcagccgtgccctggatgtcttagaatca
gtggaccggctcaacacccagtaccaagcagccatccaacttccgagtgtgcggacacca
agtcaaatcaagaaattctatgaacctatccaagatgtcgaaggagtggacttcatggaa
aaagcggacctcccattaccaagctttgaatttccaacctttggcaaggaagaagctgtg
acaggggtggcagtcggtagtgccctgcacgaactgatgcaacggatcccattgacgacg
gttccaaccatggagagcctagcaatggtcctccaagaggtcaatgccagtccggctgtc
aagaagcgaatcgacctcaagaaggttttggccttcttccagaccgacttaggccaactc
ttgcttaaggaggaagacaaagtccatcgtgaagcaccctttgccatgctcaagacggat
ccagctagtggccagaactttgtggtccgagggatcttagacggctacctactgttggaa
gaccaaatccttctctttgactacaagacagaccgttacaggaatcctcaagaattgctg
gatcgctaccaagcccaactggaactctacgcagaagcccttcgccgttcatatggtgtg
gagcaggttgaatcctatttgattttactaggcggtgagcagctgcaagtcgtttcttta
gcagatagaaaggatccatcatga
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