Streptococcus sp. A12: ATM98_05725
Help
Entry
ATM98_05725 CDS
T05522
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
stra
Streptococcus sp. A12
Pathway
stra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ATM98_05725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stra03019
]
ATM98_05725
03016 Transfer RNA biogenesis [BR:
stra03016
]
ATM98_05725
Enzymes [BR:
stra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ATM98_05725
Messenger RNA biogenesis [BR:
stra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ATM98_05725
Transfer RNA biogenesis [BR:
stra03016
]
Prokaryotic type
tRNA degradation factors
ATM98_05725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
S1_2
KH-I_KHDC4-BBP
SPATA25
DUF4404
Motif
Other DBs
NCBI-ProteinID:
AMP67263
LinkDB
All DBs
Position
complement(1166204..1168420)
Genome browser
AA seq
738 aa
AA seq
DB search
MTKQVFQTTFAGRELIVETGQVAKQANGSVVVRYGESTVLTAAVMSKKMATGDFFPLQVN
YEEKMYAAGKFPGGFMKREGRPSTDATLTARLIDRPIRPMFAEGFRNEVQVINTVLSYDE
NASAPMAAMFGSSLALSISDIPFDGPIAGVQVGYVDGQIIINPTQEQAERSLLELTVAGT
KHAINMVESGAKELSEEIMLEALLKGHEAVKELIAFQEEIVAAVGKEKAEVELLHVDADL
QAEIIAAYNSDLQKAVQVEEKLAREAATQAVKDQVTAVYEEKYADHEEFDRIMRDVAEIL
EQMEHAEVRRLITEDKVRPDGRKVDEIRPLDAVVDFLPRVHGSGLFTRGQTQALSILTLA
PMGETQIIDGLDPEYKKRFMHHYNFPQYSVGETGRYGAPGRREIGHGALGERALAQVLPS
LEEFPYAIRLVAEVLESNGSSSQASICAGTLALMAGGVPIKAPVAGIAMGLISDGNNYTV
LTDIQGLEDHFGDMDFKVAGTRDGITALQMDIKIQGITAEILTEALAQAKKARFEILDVI
EATIPEVRPELAPTAPKIDTIKIDVDKIKIVIGKGGETIDKIIAETGVKIDIDEEGNVSI
YSSDQVAINRAKEIIAGLVREAKVDEVYHAKVVRIEKFGAFVNLFDKTDALVHISEMAWT
RTNRVEDLVAIGDEVDVKIIKIDEKGRVDASMKALLPRPPKPEHSEEKGDKGHHHGDRPR
HHKPRKDFAKDAGQATKE
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaacaagtgtttcaaacgacttttgcgggtcgtgagttgatcgtagagactggt
caggttgctaagcaagcaaatggctctgttgtcgtgcgttacggtgagtcaactgtcttg
actgctgccgttatgtctaagaagatggcgactggggatttcttcccacttcaagtcaac
tacgaagaaaaaatgtatgcagctgggaaatttcctgggggctttatgaaacgtgaagga
cgtccttcaacagatgcgactttgacagcgcgtttgattgaccgtccgatccgtccaatg
tttgcggaaggtttccgtaatgaagtgcaagtcatcaacacagtcctttcttacgatgaa
aatgcatctgcaccaatggcagcgatgtttggttcatccttggcactttctatctcagat
attccatttgacggaccaatcgctggggtacaagtaggttatgttgatggtcaaatcatc
atcaaccctacgcaagaacaagctgagcgctctcttcttgaattgacagtagctggtacg
aagcacgctatcaacatggtagagtctggtgccaaagaattgtcagaagaaatcatgttg
gaagcccttctgaaaggacacgaagctgtcaaagaattgattgccttccaagaagaaatc
gttgcggcagttgggaaagaaaaagcagaagtagaattgcttcatgtagatgctgacttg
caagctgaaatcatcgcagcctacaacagcgaccttcaaaaagcagttcaagttgaagaa
aaattggcgcgtgaagctgcaactcaagccgtgaaagaccaagtcacagcagtttatgaa
gaaaaatatgcagaccacgaagaatttgaccgtatcatgcgggatgtggctgaaatcttg
gaacaaatggaacacgcagaagtgcgccgtttgattacagaagacaaggttcgtccggat
ggtcgtaaggttgatgaaatccgtcctttggatgcggttgttgacttccttcctcgtgtt
cacggttcaggtctcttcactcgtggacaaactcaagctctttctatcttgactttggcg
ccaatgggggaaacgcaaatcatcgatggtttggacccagagtacaagaaacgctttatg
caccactataacttcccacaatactctgtaggggaaactggtcgttacggtgcacctggt
cgtcgtgaaattggtcacggtgctcttggtgagcgtgcgcttgctcaagtcttgccaagc
ttggaagaattcccatatgcgattcgtctagtagcagaagtattggaatcaaacggttct
tcatctcaagcatctatctgtgcaggaacacttgcccttatggctggtggtgtgccaatc
aaggctccagtagcaggtattgccatgggtctcatctcagatggaaacaactacaccgta
ttgacagatatccaaggtttggaagaccactttggagatatggactttaaggttgcaggt
actcgtgacgggattacagcccttcaaatggatatcaagatccaagggatcactgcagaa
atcttgactgaagcgcttgcccaagccaagaaagctcgttttgaaatccttgacgtgatt
gaagcaaccattccagaagttcgtccagaattggctccaactgctccgaaaattgatacc
atcaagattgatgtggacaagatcaagattgtcatcggtaaaggtggagaaaccatcgat
aaaatcatcgctgaaacaggcgttaagattgatatcgatgaagaaggaaacgtatcgatc
tactcgagcgaccaagtggctattaaccgcgctaaagaaatcattgctggtttggttcgt
gaagctaaagtggacgaagtctaccatgctaaagttgtgcgtatcgagaaattcggtgcc
tttgtcaacctctttgacaagacggatgccctcgttcacatctctgaaatggcttggact
cgtaccaaccgtgtcgaagacttggtagccatcggtgatgaagtggatgtcaagattatc
aagattgacgaaaaaggtcgtgtcgatgcttctatgaaggcacttcttcctcgtcctcca
aaaccggaacattcagaagaaaaaggggataaggggcatcatcatggcgatcgtcctcgt
caccacaaacctagaaaagactttgccaaagatgcaggtcaagcaacgaaagaataa
DBGET
integrated database retrieval system
