Streptococcus sp. A12: ATM98_05840
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Entry
ATM98_05840 CDS
T05522
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
stra
Streptococcus sp. A12
Pathway
stra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ATM98_05840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stra03400
]
ATM98_05840
Enzymes [BR:
stra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ATM98_05840
DNA repair and recombination proteins [BR:
stra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ATM98_05840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
UvrD-helicase
DEAD
HHH_5
AAA_22
RsgA_GTPase
UvrD_C
Herpes_Helicase
nSTAND3
AAA_28
SLFN-g3_helicase
NPHP3_N
5_3_exonuc
ORF6C
HTH_IclR
T2SSE
ABC_tran
TsaE
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AMP67285
LinkDB
All DBs
Position
1192565..1195000
Genome browser
AA seq
811 aa
AA seq
DB search
MEYYFSGTIERVIFENQSSFFRILLLDINDTDAEDYDDFDIIVTGTMADIVEGEDYTFWG
ELVHHPKYGQQLQMNRYERAKPTSKGLVKYFSSDHFKGIGLKTAQKIVDLYGEDTIDKIL
QAPEKLASISGLSKKNREAFVEKLQLNYGTERVLAQLANYGIPNKLAFQIQDFYKEETLQ
IVESAPYQLVEDIQGMGFKIADQLAEELGIASDAPERFRAGLVHSLLTLSLETGDTYVEA
KELLQATIQLLEASRPVELDPASVAQELASLIEEDKVQNIDTKIFNNSLFFAEEGIRSHI
GRLLEKGKQESFDPEKIEQTIDDIEDELHIHYDPIQRKAIQEAIQQKVFVLTGGPGTGKT
TVINGIIGTYALLHQLDLRKKSQLPILLAAPTGRAARRMSELTGLPSATIHRHLGMTGDD
DTSHLDDYLDTDFIIVDEFSMVDTWLANQLLSNISSNTKLLIVGDADQLPSVSPGQVLSD
LLQIPSIPQVKLEHIFRQSEDSTIVTLASQIRKGHLPLDFTEKKPDRSYFEAPSELIAPM
IEKITSAALRNGIPARNIQVLAPMYRGSAGIDQINSLMQDLLNPLETDALFFQALDCQYR
NGDKIIHLVNDAESNVFNGDIGYITDLLLAKYTESKQDELTIQFDGNELVYPRNEWYKIR
LAYAMSIHKSQGSEFPVVILPLTNQSRRMLQRNLIYTAITRSKSKLILLGEYTAFDFATK
NTGTARKTYLIERFSDGIPQGRDSSSHSPVHLEKPIKKTEPQKELVSVENHSDSSASPAS
QQGYRLTEDNYLSIDPMIGLTEEEIQQFFKN
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggaatactatttctcaggaaccattgagcgggtcatttttgaaaatcaaagtagtttt
ttccgtatcttattgttggatatcaatgatacagatgcagaggactatgatgactttgac
attatcgttactggaacgatggcagatatcgtcgaaggagaagattataccttctgggga
gaactggtccatcatccgaaatatggccaacagttgcaaatgaatcgctatgaacgagcc
aaacccactagcaaaggcttggtgaaatacttttctagcgaccattttaaagggatcgga
ctcaaaacggcccaaaaaatcgtggatctctatggcgaggataccattgataaaattctg
caagcacctgaaaagctagcctctatctccggactttctaaaaagaatcgcgaggccttt
gtcgaaaaactacagctcaactatggtacggaacgggtcctcgcccaacttgctaactat
ggcatccctaataaactagccttccaaatccaagatttctacaaggaagaaaccttgcaa
atcgtcgaatcggctccttatcaactggtcgaagatattcaaggaatgggctttaaaatt
gccgaccaattagcagaagaattagggattgccagtgatgctcctgaacgcttccgagct
ggactagtccatagtctcttaaccctctccttagaaacaggggatacctacgttgaagcc
aaagaattgctccaagccaccatccaactcttagaagcatctcgtcccgttgagctcgat
ccagccagtgttgcccaagaattggccagtctcatcgaagaagacaaggtgcaaaacatt
gacaccaagattttcaacaacagcctcttctttgcggaagaagggatccgaagccatatc
ggtcgcctgctagaaaaaggaaagcaagaatctttcgacccagaaaaaatcgaacaaacg
attgatgacattgaagatgaactccacatccactacgaccccatccaacggaaggctatc
caagaagccatccagcaaaaggtcttcgtgctaacaggtggaccaggaacgggaaaaaca
actgttatcaatgggatcatcgggacctacgccctcctgcaccaattggatcttcgcaag
aaatctcaattaccgattctcttagccgctccaaccggtcgagcagcccgtcgaatgagt
gaactgacgggtcttccgagcgccaccattcatcgtcacttaggaatgacgggagacgac
gacacaagtcacttggacgattatctcgatacggattttatcattgtcgatgaattctct
atggtggatacttggctggccaatcagctcctcagcaatatctcctccaataccaaactc
ttaattgttggtgatgctgatcagcttccttctgtgagtcctggacaagtcttgtccgat
ctcctacagatccccagcatccctcaagtcaaactggaacacatcttccgtcaaagtgag
gattcgaccatcgtcactttggccagtcagattcgcaaaggccacctacctttagatttc
acagagaaaaaacctgatcgttcctactttgaagcgccgagtgagctcatcgctcccatg
attgaaaaaatcaccagcgctgcccttcgcaacggcattccggcccgaaacatccaggtc
ctcgctccgatgtatcgaggttctgcaggcattgatcaaataaacagtctcatgcaagac
ctcctcaatccattagaaacggatgctctattctttcaagcactggactgtcagtatcga
aatggtgacaagatcatccacctggtcaatgatgccgaaagcaatgtctttaacggagat
attggctacatcaccgacctcttgctagctaagtataccgaatccaaacaagatgaactg
accatccagtttgacggcaatgaattggtctacccccgcaatgagtggtacaagattcgc
ctggcctatgctatgagcatccacaagtcacagggaagcgaatttcctgtggtcatcctt
cctctgaccaatcagagtcggcgcatgctccaacgcaatctgatctacacagccattacc
cgttcgaaaagcaaactcatcctcttgggagaatacaccgcatttgactttgcgacaaag
aatactggaactgctcgcaaaacctatctgattgagcgtttttcggacggaatccctcaa
ggtagagactcttcctcacatagccctgtccacctagaaaagcccataaaaaaaacagag
ccccaaaaggagctcgtctcagttgaaaaccactctgactcatctgcttctccagcttct
cagcaaggctatcgattaacagaggacaattacttaagcattgatcccatgatcggcctc
acagaggaagagattcaacagttcttcaaaaactag
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