Streptococcus sp. A12: ATM98_08360
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Entry
ATM98_08360 CDS
T05522
Symbol
polC
Name
(GenBank) DNA polymerase III subunit alpha
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
stra
Streptococcus sp. A12
Pathway
stra03030
DNA replication
stra03430
Mismatch repair
stra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ATM98_08360 (polC)
03430 Mismatch repair
ATM98_08360 (polC)
03440 Homologous recombination
ATM98_08360 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stra03032
]
ATM98_08360 (polC)
03400 DNA repair and recombination proteins [BR:
stra03400
]
ATM98_08360 (polC)
Enzymes [BR:
stra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ATM98_08360 (polC)
DNA replication proteins [BR:
stra03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ATM98_08360 (polC)
DNA repair and recombination proteins [BR:
stra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ATM98_08360 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
RNase_H_2
Rv2179c-like
HHH_3
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AMP67725
LinkDB
All DBs
Position
1719788..1724179
Genome browser
AA seq
1463 aa
AA seq
DB search
MSTSFEILMNQLGMPLEMRESDAFKGAEIQEVIVHKLSRVWEFRFVFAEILPITIFQELK
NRLAEEFSKTGNRAVFEIQVKNPTFSEELLQAYYQEAFEDGPCASQGFKSMYQHLQVRSQ
GEELIISGPSSVDTEHHRKNHLPNLASQLTKFGFPHFQCRVEADDQMTEELQQAFEAEKD
QIFQAANEETLRAMESLSQMAPPPAEEKPAFDFKAKKAVAKPKLDKAEITPMIDITTEEN
RIVFEGVVFDVEQKVTRTGRVLINFKMTDYTSSFSLQKWAKNEEEAQKFDMIKKNSWLRV
RGNIEVNNFTRDLTMNVQDVQEVVHYERKDLMPEGERRVEFHAHTNMSTMDALPEVEELV
AKAAKWGHKALAITDHGNVQSFPHGYKAAKKAGIQLIYGMEANIVEDRVPITYNEVDLDL
HEATYVVFDVETTGLSAIYNDLIQVAASKMHKGNIIAEFDEFINPGHPISAFTTDLTGIT
DDHVRNAKPLKQVLEEFQEFCKDAVLVAHNATFDVGFMNANYERHGLPKITQPVIDTLEF
ARNLYPEYKRHGLGPLTKRFGVALEHHHMANYDAEATGRLLFIFIKDVAEKHGVTNLAKL
NLDLISPDSYKKARVKHATIYVKNQTGLKNMFKLVSLSNTQYFEGVPRIPRTVLDAHREG
LILGSACSEGEVFDAVVSQGVDAAVEVAKYYDFIEVMPPAIYAPLIAKEQVKDMDELQTI
IKSLIEVGDRLGKPVLATGNVHYLEPEEEIYREIIVRSLGQGAMINRTIGHGENAQPAPL
PKSHFRTTNEMLDEFAFLGEDLARKLVIENTNALAEIFEPVEVVKGDLYTPFIDKAEETV
AELTYQKAFEIYGNPLPDIVDLRIEKELTSILGNGFAVIYLASQLLVHRSNERGYLVGSR
GSVGSSFVATMIGITEVNPLSPHYVCGQCQYSEFIMDGSYGSGFDMPNKDCPNCGHKLSK
NGQDIPFETFLGFDGDKVPDIDLNFSGEDQPSAHLDVRDIFGEEYAFRAGTVGTVAAKTA
YGFVKGYERDYGKYYRDAEVERLAQGAAGVKRTTGQHPGGIVVIPNYMDVYDFTPVQYPA
DDVTAEWQTTHFNFHDIDENVLKLDVLGHDDPTMIRKLQDLSGIDPNDIPMDDPGVMALF
SGTDILGVTPEQIGTSTGMLGIPEFGTNFVRGMVDETHPTTFAELLQLSGLSHGTDVWLG
NAQDLIKAGIADLSTVIGCRDDIMVYLMHAGLDPKMAFTIMERVRKGMWLKIPEEERNAY
IEAMKANNVPEWYIESCGKIKYMFPKAHAAAYVMMALRVAYFKVHHPLYYYCAYFSIRAK
AFDIKTMGAGLEAVKARMKEIAEKRKNNEASNVEIDLYTTLEIVNEMWERGFKFGKLDLY
RSDATEFIIDGDTLIPPFVAMDGLGENVAKQIVRARKEGEFLSKTELRKRGGVSSTLVEK
MDEMGILGNMPEDNQLSLFDDLF
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactagctttgaaatcttaatgaatcagttgggaatgcctttggaaatgcgtgaa
tcagacgcttttaaaggggctgaaatccaagaggtcatcgtccataagctcagtcgtgtt
tgggaatttcgttttgtttttgccgaaattcttcccatcacgatttttcaggagctcaaa
aaccgcttggctgaggagttttcaaagacaggaaatcgagcggtgtttgagattcaggta
aagaatccaacttttagtgaggagctcttgcaagcctattatcaggaggcttttgaagat
ggtccctgtgcgagtcagggctttaagagcatgtatcaacacctacaagtccgctctcaa
ggagaagagttgatcattagtggcccttcatctgtggatacggagcaccaccggaaaaac
catctgcctaatcttgcgagtcaattgaccaagtttggttttcctcatttccagtgtcgg
gtcgaggcggatgaccagatgacagaagaactccagcaggccttcgaggctgaaaaggat
caaatcttccaagcagctaatgaagaaaccttgcgggctatggagtccttgtctcaaatg
gctccaccaccagcagaggaaaaaccagcctttgatttcaaagctaaaaaggctgtggcc
aaacccaagctggataaggcagagatcactccgatgattgatatcacgacagaagagaac
aggattgtctttgaaggggtcgtctttgatgtcgagcaaaaggtgactcggacaggtcgg
gtcttgattaatttcaagatgaccgattatacttctagtttctcgctccagaaatgggct
aaaaatgaagaagaagctcagaagtttgatatgatcaagaaaaactcgtggttacgagtt
cgtgggaacatcgaggtcaataactttacaagagatttgaccatgaatgttcaagatgtt
caagaagttgtccactatgagcgcaaggatttgatgccagaaggcgagcgtcgggtcgag
tttcatgcccataccaatatgtcgaccatggatgccctacctgaggtcgaggagttggtc
gcaaaagcagccaaatggggccacaaggctcttgccattactgatcatggcaatgtgcag
tccttccctcatggttacaaggcagctaaaaaagctgggatccaactcatctatgggatg
gaagccaatatcgttgaagaccgtgtgccgattacctacaatgaagttgatctagacctt
catgaagcaacctatgtggtttttgacgtggaaacgacaggactctcagcgatttacaat
gatttgattcaggttgccgcttctaaaatgcacaagggcaatattattgctgaatttgat
gagtttatcaatccaggccaccccatttctgcctttacaacggatctgacgggcattact
gatgaccatgttcgcaatgccaaacctttgaaacaggtcttggaggagttccaggaattc
tgcaaggatgcagttttggttgcccacaatgctacttttgacgtgggcttcatgaatgcc
aactatgagcgtcatggccttccaaaaatcactcagccagtaattgatacgctagagttt
gctcggaacctttatccagaatacaagcgtcatggtttgggacccttgaccaagcgcttt
ggtgttgccttggaacaccaccatatggccaactatgatgcggaagcgacgggccgtctg
ctctttatctttatcaaagatgtagcagaaaaacatggtgtgaccaatctcgccaagctg
aatttggatttgattagtccggattcctacaaaaaggcccgggtcaaacacgcaaccatc
tacgtcaagaaccagaccggcttgaaaaacatgttcaaactggtctctctttccaatact
caatattttgagggagttcctcggattccgcggacggttttagatgcccatcgggaaggc
ttgatcctgggatcagcttgttctgaaggagaagtcttcgatgcggtcgtctctcaagga
gttgacgcggcagtggaagtggccaagtattatgactttatcgaagtcatgcctccagcc
atctatgcgcccctcattgccaaagagcaggtcaaagatatggatgagctccaaactatc
atcaagagcttgattgaggtgggagatcgccttggaaaaccagtcttggcgacagggaat
gtgcactaccttgagcctgaggaagagatctatcgggaaatcattgtccgcagtctcggg
caaggggccatgattaaccggactatcggccatggagaaaacgcccaaccagcaccccta
ccaaaatcccatttccgtacaaccaatgaaatgctggatgaatttgcctttttaggggaa
gacttggcgcgaaaattggtcattgaaaatactaatgctttagcagaaatctttgaacct
gttgaagtggtcaagggtgacctctatacgccatttatcgacaaggccgaagaaacggtt
gccgaattgacctatcagaaggcctttgaaatctatggcaatccgctacctgatattgtt
gatttacgtattgaaaaagaattgacctcaatcctggggaatggcttcgccgttatctat
ctggcttcccaactcttggtgcatcgttccaatgaacggggttacttggtgggttcacga
ggatccgtcggatccagtttcgtagcgactatgattgggattaccgaggttaatccgctc
tctcctcactatgtctgtggtcagtgtcagtacagtgagtttatcatggatggttcttat
ggttcaggctttgatatgcccaataaggactgcccaaactgtggccacaagctcagcaaa
aacggccaagacattccgtttgagaccttccttggttttgatggggacaaggtacccgat
atcgatttgaacttctcaggggaagaccagccgagtgcccacttggatgttcgcgatatc
tttggggaagaatatgccttccgggcaggaacagtaggtacagtggctgccaagactgcc
tatggatttgtgaaaggctatgagcgggactacggcaagtattaccgggatgcagaggtg
gaacgtctggcgcaaggagccgctggggttaaacggacgaccggtcagcacccaggggga
atcgttgttattccaaactatatggacgtctatgatttcacccctgtgcagtacccagca
gatgatgtgacagctgaatggcagaccactcactttaacttccatgatatcgacgagaac
gtcctcaagctcgatgtcctaggacacgatgatccgaccatgattcgcaagctccaggac
ttgtcaggcattgacccaaacgatattcctatggatgatcctggtgtcatggccctcttc
tcagggaccgatatcttaggagtcacaccggagcaaatcggtacctcaaccggtatgctg
gggatcccagagtttggaaccaactttgttcggggcatggtcgatgagacccatccgacc
acctttgccgagttgcttcagctttctggtttgtctcacggtaccgacgtatggttagga
aatgcccaagacttgatcaaggcaggaattgcggacctatcaaccgttatcgggtgtcgg
gatgacatcatggtttacctcatgcacgctggcctagatccaaaaatggcctttaccatc
atggagcgggtgcggaaaggtatgtggctcaagattcctgaagaagagcgcaatgcttat
attgaggccatgaaggctaacaatgtacctgaatggtacatcgagtcttgtggaaagatc
aagtatatgttccccaaagcccatgcggcagcctacgttatgatggccttgcgggtggct
tactttaaggttcatcatcctctctactattactgtgcgtacttctcgattcgggccaag
gcctttgatatcaagaccatgggcgcaggcctagaagccgtgaaagcgcggatgaaggag
attgctgaaaaacgtaagaacaacgaagcttccaatgtggagattgacctctacaccacc
cttgaaattgtcaatgagatgtgggagcgtggcttcaagtttgggaagctagacctctat
cgcagtgatgcgacggaattcattatcgatggagacacccttatcccgccatttgtcgcc
atggatggattgggagagaacgtagccaagcagattgtgcgagctcgcaaagaaggagaa
ttcctctctaaaacagagttacgcaaacgtggtggcgtctcctcaaccttggtagaaaag
atggacgagatgggaatccttggcaatatgccagaggacaaccagttgagtctgtttgat
gatttgttttga
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integrated database retrieval system
