Sporosarcina trichiuri: QWT68_03120
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Entry
QWT68_03120 CDS
T10169
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
strb Sporosarcina trichiuri
Pathway
strb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
strb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QWT68_03120 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strb03400
]
QWT68_03120 (mutM)
Enzymes [BR:
strb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
QWT68_03120 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
QWT68_03120 (mutM)
DNA repair and recombination proteins [BR:
strb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QWT68_03120 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Phage_Mu_Gp45
Zn_ribbon_IS1595
Phosphonate-bd
Motif
Other DBs
NCBI-ProteinID:
WJY27987
LinkDB
All DBs
Position
564192..565064
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AA seq
290 aa
AA seq
DB search
MPELPEVEGVVRALAPVASGRTIRRVAISETVIRSKEAGKEAIVKGMPVGQFTSQLAGWT
IDSIERRSKYIYIHLSREASCRLLVSHLGMTGAWFAVGSVEDIREQKFRNHIHAVFEMED
GGLLVYSDIRRFGELRLLTCAEDHPSLLEMAPEPFDDEAESFFIHKAETPAFRKKAIKEV
IMDGRVISGCGNIYATEALFRTGIHPKRTAGRISEARKRQLFREIAAVLRESIDAGGSSI
SDYRNINGEAGSMQDRLQMYGRKTCPVCGAQTAAVQIAGRTSTYCKKCQH
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattaccggaagtcgaaggggtcgtccgggcgctcgcacctgtggcgagcggc
aggacgatccggcgtgtcgccatttccgagacggtcatccgttcgaaagaggccgggaaa
gaagcgattgtcaaagggatgcctgtcggacagttcaccagccagctggccggctggacg
atcgacagcattgagcgccgcagcaagtatatctacatccatctgtccagagaagccagc
tgccgcctgctcgtcagccatctcggcatgactggagcgtggttcgcggtcggctcggtc
gaagatatccgggaacagaaattccggaatcatatccacgccgtgttcgaaatggaggac
ggtggactgcttgtctattcggatatccgccggttcggtgaattacgtctgctgacttgt
gcggaagatcatccgtcgcttctcgaaatggcacctgagccgttcgatgatgaggcagag
tcctttttcatccataaagcggaaacgccggcattccgtaaaaaggcgatcaaggaagtg
atcatggacggacgtgtaatttcaggctgcggcaatatttacgcgacagaagcactgttc
cggacaggaatccatcccaaacggacagccggccggataagcgaagcgaggaaacggcag
ctgttccgggaaatcgcggccgtcctgagggaaagcatcgacgcagggggcagttccatt
tcggactaccgcaacatcaacggcgaagcaggttcgatgcaggacaggctgcagatgtac
gggcggaaaacctgtcctgtctgcggcgcccagacggcggccgtccagattgcgggacgc
acatcgacatactgcaagaaatgccagcattga
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