Sporosarcina trichiuri: QWT68_03270
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Entry
QWT68_03270 CDS
T10169
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
strb Sporosarcina trichiuri
Pathway
strb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
strb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QWT68_03270 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
strb03019
]
QWT68_03270 (recQ)
03400 DNA repair and recombination proteins [BR:
strb03400
]
QWT68_03270 (recQ)
Enzymes [BR:
strb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QWT68_03270 (recQ)
Messenger RNA biogenesis [BR:
strb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QWT68_03270 (recQ)
DNA repair and recombination proteins [BR:
strb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QWT68_03270 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
DUF4953
Motif
Other DBs
NCBI-ProteinID:
WJY28016
LinkDB
All DBs
Position
594493..596265
Genome browser
AA seq
590 aa
AA seq
DB search
MMEQALGVLEEKFGYPSFRAGQEQVIQLVMDGSDALCVMPTGGGKSLCYQVPAMLMEGTV
LVISPLISLMKDQVDALWQLGIPAAYINSTLSTEEYFGTLENARDGHYKLLYIAPERLES
ESFMRELGRMKVPMIAIDEAHCISQWGHDFRPSYRNISRVLNCFDEKPVLLALTATATPT
VREDIREQLGIPQEQTVLTGFERGNLTFTVVKGENREKFIKDYVSKNKDEAGIIYAATRK
AVESVHDQLARSGVAVAKYHGGMDDYERQREQDRFLNDEASVMVATNAFGMGIDKSNIRY
VIHYQMPKNMESYYQEAGRAGRDGLDSECILLFASQDIQTQRFLIEQSQDPSRMRSETEK
LQGMIDYCHTEDCLQQYIITYFGEQEPPPCGRCANCTDTREQLDVTLDAQKVLSCVIRMG
QRFGKTMIAQVLTGSRNKKLLEFRFDELSTYGLMKGKNAKEVADFIEFLISANCLSVENG
QFPTIQVAERGKDVLLGKEKIGRKGSFVTKQLTEDDPLFERLRQLRRTLAQEAGVPPFVI
FSDKTLKDMAAKKPRTADEFLDVNGVGQSKLESYGEVFITEIESFGLQEA
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgatggagcaggcgctcggcgtactcgaagagaaattcggctacccctcgttcagggca
ggccaggaacaggtcatccagctcgtcatggacggctcggacgccctttgtgtcatgccg
accggcggcggtaaatcactgtgctaccaagtgccggccatgctgatggaagggacggtc
ctcgtaatatccccactcatctcactcatgaaagaccaggtggatgccctctggcagctc
ggcatcccggctgcatacatcaacagcacactgtccacggaagaatacttcggtacgcta
gagaacgcgcgggacggccactacaaactgctgtacatcgcacctgagcggcttgaatcc
gagtcgttcatgcgtgagctcggccgcatgaaagtgccgatgatcgccatcgacgaagcc
cactgcatctcgcaatggggacacgatttccggccgagctaccgcaatatcagccgggtg
cttaattgtttcgatgaaaaaccggtcttgcttgccctcacggcaacagcgacaccgacc
gtacgggaagacatccgcgaacagctcggcattccgcaggaacagacggtgctgaccggc
ttcgagaggggcaacctgacgttcacggtcgtgaaaggcgagaaccgcgagaagttcatc
aaggactacgtcagcaagaacaaggacgaagccggcatcatctacgcggcaacgcggaaa
gcggtcgaaagtgtgcacgatcagctcgcacgcagcggtgtcgcggtcgccaaataccac
ggcggcatggacgattatgaacggcagcgcgaacaggaccggttcctgaatgacgaagca
tccgtcatggtggcgacgaacgcgttcggcatgggaatcgacaaatccaatatccgctac
gtcatccactaccagatgccgaagaacatggagagctactaccaggaagccgggcgtgcc
gggcgggacggactcgacagcgagtgcatcctgctgttcgcctcccaggacatccagacg
cagcggttcctgatcgagcagtcgcaggatccgtcgcgcatgcgttcagaaaccgagaaa
ctgcaggggatgattgactactgccatacggaggactgtctccagcagtacatcatcacc
tacttcggcgaacaggaaccgccgccgtgcggacgctgtgcgaactgtacggatacccgc
gagcagctcgacgtcacactcgatgcccagaaagtgctgtcctgcgtcatccgtatgggg
cagcggttcggcaagacgatgatcgcccaggtgctgacaggctcccgcaacaagaaactg
ctcgagttccggttcgacgaactgtcgacatacggactcatgaaagggaagaatgccaaa
gaagtggcggatttcatagagttcctcatttcggcgaactgcctgtccgtcgagaacggc
cagttcccgaccatccaagtggcggaacgggggaaagacgttcttctcggtaaagagaag
atcgggcggaaaggatcgttcgtgacgaaacagctgaccgaagatgacccgctgttcgag
cggctgcgccagctgcgccgcacactcgcccaggaagcgggcgttccgccattcgtcatc
ttctcggacaagaccctgaaggacatggccgcaaagaaaccgcggacagcggacgaattc
ctcgatgtcaacggggtcggccagagcaaactcgaatcatacggcgaagtgttcatcaca
gaaatcgagtcgttcggtctccaggaagcctga
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