KEGG   Sporosarcina trichiuri: QWT68_06715
Entry
QWT68_06715       CDS       T10169                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
strb  Sporosarcina trichiuri
Pathway
strb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:strb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    QWT68_06715 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:strb03019]
    QWT68_06715 (rny)
Messenger RNA biogenesis [BR:strb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     QWT68_06715 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_PNO1_2nd KH_KhpA-B KH_2 KH_NusA_2nd
Other DBs
NCBI-ProteinID: WJY28669
LinkDB
Position
complement(1259806..1261362)
AA seq 518 aa
MGTIIISALLGLIVGAVVMFVYNKNVNESKVTGAKHSAETIVEEAKREAEALKKEALLEA
KDENHKLRVEAETEIRERRSELQKQENRLLQREENLDRKDDSLNKREASLERKDDALSGR
QQHIEEMERKAENLVAEQQTELEKISALTRDEAKHLILDDVERELSTDIAVMTKESEQRA
KEESEKRSREILSLAVQRFAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLTGI
DLIIDDTPEAVILSGFDPVRREIARLALEKLVADGRIHPARIEEMVDKSRREVDELIRET
GEQTTFDIGVHNLHPDLIKILGRLKFRTSYGQNVLKHSTEVAYLAGLLAAELGEDVTLAR
RAGLLHDIGKAIDHEVEGSHVQIGKELAIKYKEHPVVINSIASHHGDEEATSVIAVLVAA
ADALSAARPGARSETLENYIRRLKKLEEISESYEGVEKSFAIQAGREVRIIVRPDVIDDI
TAHRLARDIRKRIEEELDYPGHIKITVLRETRAVEYAK
NT seq 1557 nt   +upstreamnt  +downstreamnt
atgggtacaatcatcatctccgctttgctcggtctcatcgtcggtgcagttgttatgttt
gtgtacaacaaaaacgtgaacgagtcgaaagtgacaggtgccaagcactccgctgaaact
atcgtggaagaggcgaagcgcgaagcggaggcattgaaaaaggaagcactgcttgaagcg
aaagatgaaaatcacaaattgcgtgtggaggctgagacggaaatacgggaacggcgctcc
gagctgcagaagcaggagaaccgcctgctgcagcgggaggagaacctggaccgtaaagat
gactccctcaacaaacgcgaagcgagtctggagcgcaaagacgatgcgctgtccggaaga
caacagcatattgaagagatggaacgcaaggcggaaaacctggtggctgaacagcagacg
gaactggagaagatttcagcgctgacacgcgacgaggcgaagcatctcatcctggatgac
gtggaacgtgaattgtccacggatatcgccgtgatgacgaaggagtccgaacagcgtgcc
aaggaagagtccgaaaaacgctcacgcgaaattctgtctcttgccgttcagcggtttgca
gctgatcatgtggcagaaacgacagtatctgtcgtcaatctgccgaatgatgaaatgaaa
gggcggatcatcggtcgggaaggccggaatatccgtacgcttgaaacgcttacaggaatc
gatctcattatcgacgatacccctgaagcggtcatcttgtccggattcgatccggtgcgc
cgtgaaattgcacggctggcattggagaaattggtggcggacggacggatccaccctgcg
cggatcgaggagatggtggataagtcgagacgcgaagtcgatgagctaatccgggaaacc
ggtgagcagacgaccttcgatatcggcgtccataacctccacccggaccttatcaagatt
ctcggccggctgaaattccggacgagctacggtcagaacgtcctgaaacattcgacggaa
gtggcgtatctcgccggtctgcttgcagcggaactcggggaggatgtcacattggcaaga
cgtgcaggactgctgcatgatatcggcaaggcgatcgaccatgaagtcgagggaagccac
gtacagatcggtaaagagcttgccatcaagtacaaagagcacccggtcgtcatcaacagc
attgcgtcacaccacggagacgaagaagcgacgtccgtgatcgcagtgctcgttgcagcg
gcggatgccctgtcggcagcacgtccgggagcgcgcagtgaaactcttgaaaactacatc
cgccgtcttaagaaactcgaagagatttcagagtcctatgaaggtgtggagaagtcattc
gccatccaggcgggacgggaagtacgcatcatcgtacggccggatgtcatcgatgacatc
acggcacaccggcttgcccgggatatccggaaacggatcgaagaggagcttgactatccg
ggtcatatcaagatcacagtgcttcgggaaacccgtgctgtggagtacgctaaataa

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