Sporosarcina trichiuri: QWT68_06715
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Entry
QWT68_06715 CDS
T10169
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
strb Sporosarcina trichiuri
Pathway
strb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
strb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QWT68_06715 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
strb03019
]
QWT68_06715 (rny)
Messenger RNA biogenesis [BR:
strb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QWT68_06715 (rny)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
KH_KhpA-B
KH_2
KH_NusA_2nd
Motif
Other DBs
NCBI-ProteinID:
WJY28669
LinkDB
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Position
complement(1259806..1261362)
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AA seq
518 aa
AA seq
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MGTIIISALLGLIVGAVVMFVYNKNVNESKVTGAKHSAETIVEEAKREAEALKKEALLEA
KDENHKLRVEAETEIRERRSELQKQENRLLQREENLDRKDDSLNKREASLERKDDALSGR
QQHIEEMERKAENLVAEQQTELEKISALTRDEAKHLILDDVERELSTDIAVMTKESEQRA
KEESEKRSREILSLAVQRFAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLTGI
DLIIDDTPEAVILSGFDPVRREIARLALEKLVADGRIHPARIEEMVDKSRREVDELIRET
GEQTTFDIGVHNLHPDLIKILGRLKFRTSYGQNVLKHSTEVAYLAGLLAAELGEDVTLAR
RAGLLHDIGKAIDHEVEGSHVQIGKELAIKYKEHPVVINSIASHHGDEEATSVIAVLVAA
ADALSAARPGARSETLENYIRRLKKLEEISESYEGVEKSFAIQAGREVRIIVRPDVIDDI
TAHRLARDIRKRIEEELDYPGHIKITVLRETRAVEYAK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgggtacaatcatcatctccgctttgctcggtctcatcgtcggtgcagttgttatgttt
gtgtacaacaaaaacgtgaacgagtcgaaagtgacaggtgccaagcactccgctgaaact
atcgtggaagaggcgaagcgcgaagcggaggcattgaaaaaggaagcactgcttgaagcg
aaagatgaaaatcacaaattgcgtgtggaggctgagacggaaatacgggaacggcgctcc
gagctgcagaagcaggagaaccgcctgctgcagcgggaggagaacctggaccgtaaagat
gactccctcaacaaacgcgaagcgagtctggagcgcaaagacgatgcgctgtccggaaga
caacagcatattgaagagatggaacgcaaggcggaaaacctggtggctgaacagcagacg
gaactggagaagatttcagcgctgacacgcgacgaggcgaagcatctcatcctggatgac
gtggaacgtgaattgtccacggatatcgccgtgatgacgaaggagtccgaacagcgtgcc
aaggaagagtccgaaaaacgctcacgcgaaattctgtctcttgccgttcagcggtttgca
gctgatcatgtggcagaaacgacagtatctgtcgtcaatctgccgaatgatgaaatgaaa
gggcggatcatcggtcgggaaggccggaatatccgtacgcttgaaacgcttacaggaatc
gatctcattatcgacgatacccctgaagcggtcatcttgtccggattcgatccggtgcgc
cgtgaaattgcacggctggcattggagaaattggtggcggacggacggatccaccctgcg
cggatcgaggagatggtggataagtcgagacgcgaagtcgatgagctaatccgggaaacc
ggtgagcagacgaccttcgatatcggcgtccataacctccacccggaccttatcaagatt
ctcggccggctgaaattccggacgagctacggtcagaacgtcctgaaacattcgacggaa
gtggcgtatctcgccggtctgcttgcagcggaactcggggaggatgtcacattggcaaga
cgtgcaggactgctgcatgatatcggcaaggcgatcgaccatgaagtcgagggaagccac
gtacagatcggtaaagagcttgccatcaagtacaaagagcacccggtcgtcatcaacagc
attgcgtcacaccacggagacgaagaagcgacgtccgtgatcgcagtgctcgttgcagcg
gcggatgccctgtcggcagcacgtccgggagcgcgcagtgaaactcttgaaaactacatc
cgccgtcttaagaaactcgaagagatttcagagtcctatgaaggtgtggagaagtcattc
gccatccaggcgggacgggaagtacgcatcatcgtacggccggatgtcatcgatgacatc
acggcacaccggcttgcccgggatatccggaaacggatcgaagaggagcttgactatccg
ggtcatatcaagatcacagtgcttcgggaaacccgtgctgtggagtacgctaaataa
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