Sporosarcina trichiuri: QWT68_06840
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Entry
QWT68_06840 CDS
T10169
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
strb Sporosarcina trichiuri
Brite
KEGG Orthology (KO) [BR:
strb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
strb03016
]
QWT68_06840 (truB)
Enzymes [BR:
strb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
QWT68_06840 (truB)
Transfer RNA biogenesis [BR:
strb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
QWT68_06840 (truB)
Prokaryotic type
QWT68_06840 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
WJY28694
LinkDB
All DBs
Position
complement(1288806..1289753)
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AA seq
315 aa
AA seq
DB search
MDGILPLWKEKGMTSHDCVFKLRKILRTKKVGHTGTLDPNVEGVLPICIGQATKTASYIT
DSGKEYIAEVSIGTATETEDADGEAVDQDLSLKSISRAEVLAVLSSLTGPITQIPPMYSA
VKVNGRRLYEYARKGIEVDRPERTVFIEKIDLLSGESEFKGREPKFTIRVACGKGTYIRT
LAVQIGEQLGYPAHMSALVRTASGTFTKEDCLTLEQVKEEMDSGQLLPHLRPLESALCGL
PFIEAPSDLLERVLNGQVLPQHAMLETSDEIVFSDDGKALAVYARHPEKPGLIKPVKMFP
ANRQKGDDSSGRHQA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggatgggattctgccgctctggaaagaaaaagggatgacgtcccatgactgtgtattc
aagctgcggaaaatcttgcgtacgaaaaaggtggggcacaccggcacgctcgatccgaac
gtggaaggagtactgccgatctgcatcggccaggcgacgaaaactgcatcatatatcacg
gattccggaaaagaatatatagcagaagtctcgatcggtacagcgacggaaaccgaagat
gcggatggggaggcggtggatcaggatctttccttgaaatcgatcagccgtgcagaggtg
cttgccgtcctttcgtccctgaccggtccgatcacccagattccgccgatgtattccgcc
gtgaaagtgaacggacgcaggctgtatgaatatgcgcgcaaaggaatagaagtggatcgc
ccggaacgaacggtgttcatcgaaaagatcgacctgctgagcggggagtctgaattcaag
ggacgtgaaccgaagttcaccatccgggtggcatgcggaaaaggcacttacatccggacc
cttgccgtgcagatcggggaacagctcggctatcccgcacacatgtccgctttggtgcgt
acggcttccggcaccttcacgaaggaagactgcctgaccctggagcaagtgaaggaagag
atggacagcgggcagcttctgccgcatctccggccgctcgagtcagcactatgcggattg
ccattcatcgaagcacccagtgaccttctggagcgggtcctgaatggacaagtgctcccg
cagcacgccatgctggaaacatcggatgaaatcgtgttttccgatgacgggaaagcgctg
gcagtctatgcacgccatccggaaaaaccgggactcatcaagcccgtgaaaatgtttccg
gccaaccgacaaaagggggacgacagcagtggacgtcatcaagcttga
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