Sporosarcina trichiuri: QWT68_07125
Help
Entry
QWT68_07125 CDS
T10169
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
strb Sporosarcina trichiuri
Brite
KEGG Orthology (KO) [BR:
strb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
strb03032
]
QWT68_07125 (topA)
03400 DNA repair and recombination proteins [BR:
strb03400
]
QWT68_07125 (topA)
Enzymes [BR:
strb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
QWT68_07125 (topA)
DNA replication proteins [BR:
strb03032
]
Prokaryotic type
DNA Topoisomerases
QWT68_07125 (topA)
DNA repair and recombination proteins [BR:
strb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QWT68_07125 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
WJY28749
LinkDB
All DBs
Position
complement(1342693..1344771)
Genome browser
AA seq
692 aa
AA seq
DB search
MADYLVIVESPAKAKTIERYLGKKYKVRASLGHLRDLPRSQMGVDVENNYEPKYITIRGK
GPILQDLKKEAKKAKKIFLAADPDREGEAIAWHLAHQLGVDEETDCRVVFNEITKDAIKD
SFKHPRPINSDLVDAQQARRILDRLVGYNISPILWKKVKKGLSAGRVQSVALKLIIDREE
EIKVFEPEEYWTIGGDFSKTEGAFNASFYGKSGKKVKLGDKQQVDEILGQLDGDGFTVTK
VVKKERKRNPAAPFTTSSLQQEAARKLNFRAKKTMMIAQQLYEGITVGKEGIVGLITYMR
TDSTRISETAQGEAKEHIGTMYGKEYLRSTKTTGKPAAAKTQDAHEAVRPTSVMRTPDAM
KEFLSKDQLKLYKLIWSRFVASQMAPAVLDTVTADLVNSGIQFRATGSQVKFQGFMKVYV
ESQDDKEEEKDNVLPPLEEGETVECTKIDPKQHFTQPPPRYSEARLVKTLEELGIGRPST
YAPTLDTIQRRGYVTLDAKRFVPTELGEIVNAAVNQYFSDITNAEFTAKMEQSLDQIEEG
DIAWVKVIDDFYKDFEKHLKIADEEMEKIEIKDEPAGEDCEKCGAPMVFKMGRYGKFMAC
SNFPDCRNTKAIVKPIGVTCPLCKKGEVVERKSKKNRIFYGCDRYPDCEYISWDKPISRP
CPKCESTLVEKRLKKGLQIQCTECDYKENPQQ
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcggattacttggtaatagtggaatcacccgcgaaagcgaaaacaatcgagcggtac
ttaggaaagaaatacaaggtgcgcgcttccctcggtcacctgcgcgatctgccgcgcagt
cagatgggagtcgacgttgaaaataattatgagccgaagtatataacgatccgtgggaaa
ggcccgatcttgcaggacttgaaaaaagaagcgaaaaaagcgaaaaagatctttctcgca
gctgaccccgacagagagggggaagcgatcgcctggcacctcgcgcaccagctcggtgtg
gatgaagaaacggactgccgtgtcgtcttcaacgaaattacgaaagacgccatcaaagat
tcgttcaagcatccgcgcccgatcaattcagaccttgtggatgcccagcaggcacggcgc
atcctcgatcgtctggtcggctataatataagcccgatactgtggaagaaagtgaaaaag
ggactctctgcaggccgtgtccaatccgtggccctcaaactgatcatcgaccgggaagag
gagatcaaggtcttcgaaccggaagaatactggacgatcggcggagacttcagcaaaacg
gaaggtgcgttcaatgcctcgttctacggcaaatcaggcaagaaagtgaagctcggcgac
aaacagcaggtggacgaaattctcggccagctcgacggcgacgggttcactgttacaaaa
gtcgtgaaaaaagagaggaaacggaatcccgcagcacctttcacgacgtcttccctgcag
caggaagctgcccgtaagctcaatttccgggccaagaagacaatgatgatcgcccagcag
ctctacgaagggatcactgtcggcaaagaagggatcgtcggcctgatcacctacatgcgt
accgactcgacccggatttcggaaactgcgcaaggtgaagcgaaagagcatatcgggacc
atgtacgggaaggagtatctccgcagtacgaaaacaacgggcaagcctgctgcagcgaag
acgcaggatgcccatgaagcggtgcggcccacctccgtcatgaggacaccagatgcgatg
aaagaattcttgtcgaaagaccagctgaaactgtacaagctcatctggtcccgttttgtc
gcgagccagatggcgccggcagtcctcgatacagtgactgcggatcttgtaaacagcggc
atccagttcagggcgacaggctcccaggtgaaattccaaggcttcatgaaagtctacgtc
gagagccaggacgataaggaagaggagaaggataacgtccttccgccactggaggaaggg
gaaactgtcgaatgtacgaagatcgatccgaaacagcacttcacgcagccgccgccccgt
tattcggaagcccgtctcgtcaagacactggaagagctcggcatcggccgtccgtccacc
tacgcgccgacactggatacgatccagagacgcggatatgtgacgcttgacgccaagcgg
ttcgtaccgaccgaactcggggagatcgtcaacgcggcggtgaaccaatacttttcggat
atcaccaatgccgaattcacggcaaaaatggaacagagcctcgaccagatcgaagaaggc
gacatcgcctgggtgaaagtgatcgatgacttctacaaagatttcgagaagcacctcaag
atcgctgatgaggaaatggaaaaaatcgaaatcaaagacgagcctgccggcgaagattgt
gaaaagtgcggagccccaatggtcttcaaaatgggacggtacggtaaattcatggcttgt
tcgaatttcccggactgccgcaatacgaaagccatcgtcaagccgatcggcgtcacatgt
cccctatgtaaaaaaggggaggtcgtcgagcggaagagcaagaaaaaccggattttctat
ggctgcgaccggtacccggactgtgaatatatctcatgggataagccgatctccaggcct
tgtccgaagtgtgaaagcacgttagttgaaaaacgattgaaaaaaggtcttcaaatccag
tgtacggaatgcgattataaagagaacccgcaacaataa
DBGET
integrated database retrieval system
