Sporosarcina trichiuri: QWT68_08190
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Entry
QWT68_08190 CDS
T10169
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
strb Sporosarcina trichiuri
Brite
KEGG Orthology (KO) [BR:
strb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
strb03400
]
QWT68_08190 (addB)
Enzymes [BR:
strb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QWT68_08190 (addB)
DNA repair and recombination proteins [BR:
strb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
QWT68_08190 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
WJY26067
LinkDB
All DBs
Position
complement(1550433..1553933)
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AA seq
1166 aa
AA seq
DB search
MTLRMITGRSGTGKTYTIEQEIAGALREDPLGAPIILIVPDQMSFSMEHSLSSRFGLHGM
VRAQVLTFKRLAWRILQETGGITRREVDAFGYRMLIRSVLEENKDEFTLFRQAADKRGFT
EQVEGVLKEFSRYCLDHTALTQLNSELTAADAPRSLIDKAGDLSLLLGKVEERLGAGYVD
SEGHLAMLTEQIRFSEYIREADIYIDGFELLTNREHEIIRELLKYAKRVNIALPTDEAAG
TAEDHELFYSPMRTKQIITEIAKGEAIEIEPELRLTDARRFRNPDVRHLEAQFDRYPADR
QTSAGDVRIVEAADRRAELHAVARSIRELVRNGRRYQDIAVLYRQPDVYDELIETIFPLY
EIPVFISRKKPMLHHPLIEFTRSVLEAVTGNWSYEAMFRAVKTDLFFPYGEDRKLWRERA
DRLENYVLAHGIHGRRWFDEDRWRVKKYRGLELHTDVQTDEELAMQAELHSVRDLIRGPL
ETFGSRLKRAKDGRQAAEALFTFMEDLRGYDKIIGLRAEEETAGRLLGASEHEQAWSGWI
NVLDQFVLMFGDADMPAKEAIRVLDEGFDTLEFARIPPSLDQVTVMTVDLATFLNIDEVF
VIGVNDGVLPQRIDNEGLLSDADREWIGTIGFELAPSAKTRLMDETYKAYRAFTAAAEGL
TVTYPLADEAGKALIPSLYVPRLGQIFEGLTIEPAAADPLDLPDGSDDWPYISHPRPTLP
YASAQLRSFGTDGTMSPLWRAVIAYYEDDPLWSSILAGIHGQKKTGTETERLAPGITAGL
YGESLNSSVSRVESYYSCPFQHFASYGLGLRERTEFTLEAPAIGDLFHAALKWVSDEMMR
TGANWAGLTKQDTFRLAHDAVESIAPFFFHRILLTTNRHMYIKRKLTHIIQRTIAALSSQ
ATASSFQPIAVEVGFGPGEQMPPLSIPLKRGGQMNLRGRIDRVDAAKVDGKTYIRIVDYK
SSSKALNLTEIYYGLSLQMLTYLDVALEHADEWIQLQADPAGMLYVHVHNPMIRSIQELS
EDAIEQEMMKSFTMKGYVLEDLSVAKEMDSGIEQSSSIIPARVKKDGTFYSNSKVLPPDD
MQMLRSAVRKRHGQAGDAMLAGDTRVYPYRLKEHMPCTYCPYQGVCQFDKTDPEAAFRQY
EDLSASESLEKMRKEAEGDAHTTETR
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgcgcatgataacaggacgttcaggaacaggcaagacgtatacgatcgagcag
gagatcgccggagcgctgcgggaagacccgctcggcgcgccgatcatcctcatcgtgccc
gatcagatgtcgttctcgatggagcacagtctctcctcacggttcggtctccatgggatg
gtgcgtgcacaggtactgacgttcaagcggctcgcctggcgcattctgcaggagaccggc
ggcatcacacgccgggaagtggacgcgttcggctaccggatgctgatccggagcgtgctg
gaagagaataaggatgagttcacgctgttccggcaggcggcggacaagcgcggcttcacc
gagcaggtcgagggcgttctgaaggaattcagccgctactgtctcgatcacacagcactg
acacagctcaacagcgaattgacggcagccgatgcgccccggtccctgatcgacaaagcg
ggggatctgtccctgctgctcggaaaagtcgaagagcggctcggcgcgggctatgtcgac
agcgaagggcatttggcgatgctgacggagcagatccggttctcggagtatatccgggag
gcggatatctacatagacggcttcgaattgctgacgaaccgggaacacgaaatcatccgg
gagctgctgaaatacgccaaacgggtcaacatcgccctgccgacggacgaagcggcaggc
accgcggaagaccacgagctgttctacagcccgatgcgcacgaagcagatcatcacggag
atcgcgaaaggcgaggccatcgaaatcgaaccggaactccgcctgacggacgcccggcgt
ttccggaatccggacgtccgccacctcgaggcgcagttcgaccgctatccagccgaccgg
cagaccagcgcgggggacgtacgcatcgtggaagcagcggaccggcgtgcggaactccat
gccgttgcccggtcgatccgggagctcgtccggaacggcagacggtaccaggacatcgcc
gtgctgtaccgccagcctgatgtctacgacgaattgatcgaaacgatctttccgctctat
gagattccggtgttcatcagccgcaagaaaccgatgctccaccatccgctcatcgagttc
acgcggtccgtgctcgaagcggtgaccggcaactggtcgtacgaggcgatgttccgcgcc
gtcaagacggatctgttctttccgtacggcgaagatcggaaactgtggcgggaacgggcg
gaccgtctggagaactatgtgctcgcccacggcatccatggccgccgctggttcgacgaa
gaccggtggcgtgtgaagaaataccggggccttgagctgcatacggacgtccagacggat
gaagaacttgccatgcaggcggaactgcacagcgtccgcgatctgatccgcggcccgctg
gagacgttcggcagccggctgaaacgcgccaaggacggacgccaggcggccgaagccctg
ttcaccttcatggaggacttgcggggctacgacaagatcatcggcctccgggcggaagag
gaaacggccggccggcttctcggcgcttcggaacacgaacaggcctggagcgggtggatc
aacgtgctcgaccagttcgtgctcatgttcggagacgccgatatgcctgcaaaagaagcg
atccgtgtgctcgacgaaggattcgatacgctcgaattcgcccgcattccgccgtcactc
gaccaagtgacggtcatgacggtcgacctggcgacgttcctgaatatcgacgaagtgttc
gtaatcggcgtgaacgacggcgtcctgccgcagcggatcgataacgaagggcttctgtcc
gatgcggatcgtgaatggatcgggacgattggtttcgaactggcgccttccgcgaaaaca
cgcctgatggatgaaacctataaagcataccgggcattcacagcggccgcagaagggctg
acggttacgtatccgctcgcggacgaagctggcaaagcgctcatcccgtcgctgtacgtg
ccgcgtctcggccagattttcgaagggctaacgatcgaaccggctgcggccgacccgctc
gatctgcccgacggatcggatgattggccgtacatcagccatccgcgcccgacactgccg
tatgcttccgcacaactgcgcagtttcgggacggatggcaccatgagcccgctgtggcgc
gctgtcatcgcctactatgaagacgatccgctctggtcttcgatcctcgcgggcattcac
ggccagaagaagacaggtaccgagacggaacggcttgcacccggtatcacggcgggcctc
tatggcgagtcgctgaattccagtgtgtcgcgcgtggaatcgtattacagctgcccgttc
cagcattttgcgtcgtacggcctcggcctgcgggagcggacggaattcactctggaagcg
ccggcgatcggcgatctgttccatgcagcactgaaatgggtgtcggatgaaatgatgagg
acaggggcgaactgggccggcctgacgaagcaggacacattccgtctcgcccatgacgcc
gtcgaaagcatcgcaccgttcttcttccatcggatcctgctgacgaccaaccggcatatg
tacatcaaacggaagctgacgcatatcatccagaggacgatcgctgcactcagcagccag
gcgacggcctcctcgttccagccgatcgctgtggaagtcgggttcggaccgggcgaacag
atgccgccgctgtcaattccgctgaagcgcggcgggcagatgaacctccgggggcggatt
gaccgggtcgatgccgcaaaagtcgacggcaagacgtatatccggatcgtcgactataaa
tcatcatccaaggcgctcaacctgacggaaatctactatggcctctccctgcagatgctg
acgtacctcgacgtcgcgctggagcatgccgatgaatggatccagctgcaggcggatcct
gccgggatgctgtacgtccatgtgcacaacccgatgatccgcagcatccaggaattgtcg
gaagacgcgatcgagcaggaaatgatgaaatccttcacgatgaaaggctacgttctcgaa
gacctgtccgtcgcaaaggagatggacagcggcatcgaacagtcctcctcgatcattccg
gcccgggtcaagaaggacggtacattctactcgaattccaaagtgctgccgcctgatgac
atgcagatgctgcggtccgccgtacggaaacggcacggccaggcaggggacgcgatgctc
gcgggggacacccgcgtctatccataccgcctgaaggagcatatgccgtgcacgtattgt
ccgtatcagggcgtctgccagttcgataagacggaccctgaggcggcgttccggcagtac
gaagatttgtcggcatcggaatcactcgaaaaaatgaggaaggaggcggaaggcgatgca
cataccaccgaaacccgctga
DBGET
integrated database retrieval system
