Sporosarcina trichiuri: QWT68_10570
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Entry
QWT68_10570 CDS
T10169
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
strb Sporosarcina trichiuri
Pathway
strb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
strb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QWT68_10570 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
strb03021
]
QWT68_10570 (rho)
03019 Messenger RNA biogenesis [BR:
strb03019
]
QWT68_10570 (rho)
Transcription machinery [BR:
strb03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
QWT68_10570 (rho)
Messenger RNA biogenesis [BR:
strb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QWT68_10570 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
NACHT
S1CSD-TOTE-2
ATPase_2
AAA_25
AAA_22
AAA
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
WJY26524
LinkDB
All DBs
Position
complement(2087806..2089089)
Genome browser
AA seq
427 aa
AA seq
DB search
MTMITLADLENMTLKELYALAKEFKISYYSKLTKKELIFSILKSRAEQEGFFFMEGVLEI
IQSEGYGFLRPINYSSSSEDIYISASQIRRFDLRNGDKVTGKVRPPKENERYYGLLQVEA
VNGQNPEVARERVHFPALTPLYPTRHIKLETEPRNLSTRIMDLVSPVGFGQRGLIVAPPK
AGKTMLLKEIANAITTNHPEAELIVLLIDERPEEVTDIERSVQADVVSSTFDEVPENHVK
VAELVLERAMRLVEHKRDVVILMDSITRLARAYNLIIPPSGRTLSGGIDPAAFHRPKRFF
GAARNLEEGGSLTILATALVDTGSRMDEVIYEEFKGTGNMELHLDRALAERRIFPAIDIR
RSGTRKEELLVPKEQLDKLWAIRKTFSDAPDFAERFLKKLRHTKTNAEFFDKLNEDMKTQ
RNGKGLI
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgattaccctcgctgatctggagaacatgacactcaaagaactctatgcgctc
gcaaaagaattcaaaatcagctattacagcaaactgacgaagaaggaactcatcttttcc
atattgaaatcgcgcgccgagcaggaaggcttcttcttcatggaaggggtgctggagatc
atccagtcggaaggctatggattccttcggccgatcaactactcctccagttccgaagat
atctacatctctgcgtcccagatccgccggtttgacttgcggaacggggacaaagtgaca
gggaaagtccgtccgccgaaagagaacgagcgctactacggcctcctgcaggtcgaagcc
gtcaatggacagaacccggaagtcgcgcgtgaacgcgtccacttcccggcactgacaccg
ctctatccgacccggcacatcaagctcgagacggagccgcgcaacctgtcgacccgcatc
atggatcttgtatcgccggtcggtttcggccagcggggactgatcgtcgcaccgccgaaa
gcggggaagacgatgctgttgaaagaaatcgcgaacgccatcacgacgaaccacccggaa
gccgaactcatcgtgctgctcatcgacgaacgtccggaagaagtgaccgacatcgaacgc
tccgtccaggcggatgttgtcagctcgacattcgatgaagtgccggaaaaccacgtcaaa
gtggcggaactcgtcctcgagcgcgccatgcgtctcgtcgagcacaaacgcgacgtcgtc
atcctgatggattcgatcacacgtcttgcgcgtgcctataacttgatcattccgccgagc
ggccgcacactgtcaggcggtatcgacccggctgccttccaccggccgaaacggttcttc
ggcgcggcccgcaacctggaagaaggcggcagcctcacaatccttgcgacggccctcgtc
gacaccggatcccgcatggacgaagtcatctacgaagaattcaaaggcaccggcaacatg
gagctgcatctcgaccgggcgctcgccgaacgacggatcttcccggctatcgacatccgc
cgctccggcacgcggaaagaggaactgctcgtcccgaaagaacagctcgacaaactatgg
gccatccgcaaaaccttctcggacgcccccgacttcgccgagcgcttcctgaaaaaactg
cgccacaccaaaaccaacgccgaattcttcgacaaactcaacgaagacatgaaaacccag
agaaacggcaaagggctaatataa
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